Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02947 ATGATGAGTGGGTTGAATAATGTTTCTGACGATAGCCCTCGGCAATCTCTTACCATGCAATTTTCTTCCCTCATGATCATCGATCCCGGCCGTTTATCTTACGACAAACTTCCTTCCCAAACTCTCACTCTCTCCATCCTCAAATTGGATTCCTCTTCCTTCCATGTCGAAGTTCCAAAAACAGCAACTGTTGCGGTACTCAAGCAGGCTGTAGAGTCGGCTTTTAGTCACGTACCTCTGAAAGGACCCGAGAAAATATCATGGCCACTTGTTTGGGGACGATTTTGTTTATGCTATGAAGGACAGAAGTTAGTTACAGAAACTGATTATCTTAGAGATTATGGTATCAAGGATGGTGATCAGCTTCGTTTCGTTCGCCATGTATCCAACATCTGTAGTTTTCAAAGACAACCGTTGAAGAAAAGAAATATCAATTTGAAACAACATGGGAGATCATCATCACAAGTGAATGGATGTCAACAGAAAGAACatgatgatgatgatgatgaCAACATTGGTTTAGATCATATAGTGATAGAGAATGGGAAGATCCAACATAGCAATGCAGAAGAAAATTGCCTTGGAATGAGCAGCAGGTTAACTGGATATTTGGGAGGGCTGTTTTCAGAGACCCGTATGGCAGTTGTGAGGAAAGCTAGAATGGAAGGTGGGGTTTGTCGTTCCATGATTTCCAAAGGTATAGTGAGCAGTTTAAGGAAGGTTAAAGGGATTGTAGGCCATTGCAGGAGGCCACATCGAAGACACACATGGAGAGAGTTTTCATCTTTATGA 792 0.4116 MMSGLNNVSDDSPRQSLTMQFSSLMIIDPGRLSYDKLPSQTLTLSILKLDSSSFHVEVPKTATVAVLKQAVESAFSHVPLKGPEKISWPLVWGRFCLCYEGQKLVTETDYLRDYGIKDGDQLRFVRHVSNICSFQRQPLKKRNINLKQHGRSSSQVNGCQQKEHDDDDDDNIGLDHIVIENGKIQHSNAEENCLGMSSRLTGYLGGLFSETRMAVVRKARMEGGVCRSMISKGIVSSLRKVKGIVGHCRRPHRRHTWREFSSL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02947 263 MobiDBLite consensus disorder prediction 145 170 - -
Car05g02947 263 PANTHER - 11 251 - -
Car05g02947 263 Gene3D - 37 135 - -
Car05g02947 263 SUPERFAMILY Ubiquitin-like 37 129 IPR029071 -
Car05g02947 263 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 11 251 IPR039690 GO:0000398|GO:0005689
Car05g02947 263 CDD Ubl_SNRNP25 42 127 IPR040610 -
Car05g02947 263 ProSiteProfiles Ubiquitin domain profile. 42 125 IPR000626 GO:0005515
Car05g02947 263 Pfam Ubiquitin-like domain 42 128 IPR040610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02947 Car-Chr5 74437691 74440643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02947 - - mtr:MTR_3g106830 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02947 05 74437691 74440643 Car05g02947 05 74437691 74440643 ECH
Car05g02947 05 74437691 74440643 Car04g03188 04 60211457 60213905 ECH
Car04g03188 04 60211457 60213905 Car05g02947 05 74437691 74440643 PCT