Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03188 ATGGCGGATACTACTTTGTCGCTGATAGTGCCCAACGCCAAGAAGAAAACCACGCAATTttcttcttcttcttcagtttcttctatattttctAGGAAGAGTTTTTCGTTGTACGATAAGCTTCCTTCACTACCTTTAAGGCTCTCTGTTCTCAAATTAGACGGTTCTTCCTTCGATATTCAAGTTCCGAAGGCAGCAACTATTGCGGAACTTAAGGATGCAGTGGAAGCTGTATTTAGTCACATGCCTCAAAAGGGTCCAGGCAAAATTTCATGGCCACATGTCTGGGGGCAGTTTTGCTTATGCTATGATGGAAAAAAGCTAATTATAGAGGAGGATTATCTTAGAAATTATGGCGTCAAGGATGGTGACCAGCTTCATTTCATCCGCCATATGTCAAACAACTGCGGTGTTCAAAGAAAGCGGTCAAAGAAAAGAGTTTTCCATTTGAAACAACACAGGAGGTACGAGTTTTTGAATGATCTCTTATATCTATTATATatatttaaaacagactctgctgacacctcatactatttattccacatatgcaaatatttcccacaAATTTTAGAGAGTTTCCTCTACTCAGTTTCTAAATAG 603 0.3367 MADTTLSLIVPNAKKKTTQFSSSSSVSSIFSRKSFSLYDKLPSLPLRLSVLKLDGSSFDIQVPKAATIAELKDAVEAVFSHMPQKGPGKISWPHVWGQFCLCYDGKKLIIEEDYLRNYGVKDGDQLHFIRHMSNNCGVQRKRSKKRVFHLKQHRRYEFLNDLLYLLYIFKTDSADTSYYLFHICKYFPQILESFLYSVSK 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03188 200 Gene3D - 43 140 - -
Car04g03188 200 PANTHER - 2 158 - -
Car04g03188 200 CDD Ubl_SNRNP25 46 131 IPR040610 -
Car04g03188 200 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 2 158 IPR039690 GO:0000398|GO:0005689
Car04g03188 200 SUPERFAMILY Ubiquitin-like 44 137 IPR029071 -
Car04g03188 200 Pfam Ubiquitin-like domain 46 132 IPR040610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03188 Car-Chr4 60211457 60213905 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03188 - K13153 gmx:100819176 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03188 04 60211457 60213905 Car04g03188 04 60211457 60213905 ECH
Car05g02947 05 74437691 74440643 Car04g03188 04 60211457 60213905 ECH
Car04g03188 04 60211457 60213905 Car05g02947 05 74437691 74440643 PCT