Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02943 ATGGCTTCCAACAAATTCTCTATCACAATTTTAGTGATTTTTCTCCTTGCTTACTTAACATTCACTGAGGCTAATGGTTCATGCccaccatcaccaaagccaaaaccaccaccaccaccttcaccTAAGCCTTGTCCTACTCCAGCTTCCGCTCCACCTCCAGTCCAAGGTTCATGCCCCAAAGACACCTTAAAGTTAGGGGTTTGTGCTGATCTTTTAAGGTTGGTTAAGGTTCCTGTTGGAAATCCTCCTTCAGGTAGTAGTTGTTGTGCATTGATAAAAGGTTTGGCTGATTTGGAGGCTGCACTTTGTCTTTGCACTGCAATTAAGACCAATGTGCTTGGAAATAACTTGAATGTACCTGTCACACTCACTTGGATCCTTAGTGCATGTCAAAAGACACTGCCTCGTGGTTTCCAATGTGCTTAA 429 0.3846 MASNKFSITILVIFLLAYLTFTEANGSCPPSPKPKPPPPPSPKPCPTPASAPPPVQGSCPKDTLKLGVCADLLRLVKVPVGNPPSGSSCCALIKGLADLEAALCLCTAIKTNVLGNNLNVPVTLTWILSACQKTLPRGFQCA 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02943 142 Gene3D - 58 142 IPR036312 -
Car05g02943 142 SMART aai_6 59 141 IPR016140 -
Car05g02943 142 PANTHER - 1 26 - -
Car05g02943 142 PANTHER - 27 142 - -
Car05g02943 142 CDD HPS_like 57 141 IPR027923 -
Car05g02943 142 MobiDBLite consensus disorder prediction 29 55 - -
Car05g02943 142 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 62 141 IPR036312 -
Car05g02943 142 Pfam Hydrophobic seed protein 59 142 IPR027923 -
Car05g02943 142 MobiDBLite consensus disorder prediction 28 57 - -
Car05g02943 142 PANTHER LIPID TRANSFER PROTEIN 27 142 - -
Car05g02943 142 PANTHER LIPID TRANSFER PROTEIN 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02943 Car-Chr5 74403051 74403647 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02943 50 141 Acyl Lipid Metabolism Gene Families AT4G22490 37.234 3.26e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02943 - - mtr:MTR_3g106750 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02943 05 74403051 74403647 Car05g02943 05 74403051 74403647 ECH
Car04g03191 04 60266935 60268099 Car05g02943 05 74403051 74403647 PCT