Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03191 ATGGCTTCCACCAAGCTTAATGCACTCATTATATTATTTTCTCTTCTTGCTTATTCAACATTTTCTCATGCTTGTGGTCATTGCAAGCATACTCCAACACATAAGAAAAGCCCTTCAAAAAAAGGAAAATGTCCTAGTGACACATTAAAGCTAGGAGTTTGTGCTGATGTTTTAGGACTTGTTAATATTATTGTTGGAACTCCTTCTTCAAGCAAGTGTTGTGCATTGCTTCAAGGTTTGGCTGATTTAGAGGCAGCAATTTGTCTTTGCACTGCTATTAAGGCTAATGTTCTTGGTATCAACTTGAATGTGCCTATCACACTAAGTCTCCTACTTAGTGCTTGCCAAAAATCTATTCCTTCTGGTTTCAAATGTTCTTAA 381 0.3675 MASTKLNALIILFSLLAYSTFSHACGHCKHTPTHKKSPSKKGKCPSDTLKLGVCADVLGLVNIIVGTPSSSKCCALLQGLADLEAAICLCTAIKANVLGINLNVPITLSLLLSACQKSIPSGFKCS 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03191 126 SMART aai_6 44 125 IPR016140 -
Car04g03191 126 Gene3D - 42 126 IPR036312 -
Car04g03191 126 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 47 125 IPR036312 -
Car04g03191 126 Pfam Hydrophobic seed protein 44 126 IPR027923 -
Car04g03191 126 CDD HPS_like 42 125 IPR027923 -
Car04g03191 126 PANTHER - 1 126 - -
Car04g03191 126 PANTHER PROLINE-RICH PROTEIN DC2.15 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03191 Car-Chr4 60266935 60268099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03191 42 125 Acyl Lipid Metabolism Gene Families AT4G22490 38.095 9.05e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03191 - - mtr:MTR_1g012710 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03191 04 60266935 60268099 Car04g03191 04 60266935 60268099 ECH
Car04g03191 04 60266935 60268099 Car05g02943 05 74403051 74403647 PCT