Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02934 ATGCAACACTTCCGAACTTCGACTCCACAATTTTCTTCCCCTGCACCATCTTTACCCAATCCCAACCCACCAAAATATCCAAAGTTGGTTTCAGCCTTAGTTCTTGGCTCTGCTCTTGCACTTCTCTATTACTTCTCCAAACCCAATATTTTCCCTCCCAATTCTTCACACTCATTCTTTACAAAATTATCCCTTCCTGAATTTACCAATAATAACTTACTCTTTCGAGATGCATACAGAAGTAAGGTTTTCTTCAATTATGAGAAGCGCATAAGATTGCATAGTCCACCTGAAAAGTTGTTCCAGTTTTTCCTCCATCTGAATCAAACCTCGTATTTGTTTTTGGTAACATTGCTTAGCATCCCAGAATCAAGCTTTTCTGCAGTATTTAAAATGTTTGACATGGATAATGATGGGGAGATAGATAAAGAAGAATTCAAAAGAGTGATGGCATCAATGCGACAAACCGGCCAAAAGGACAATGCTTCTGCAGAAAATGGAAGCATGATGGAATACTTATTTGGTAAAGATGGAAAAGGACGACTCAGACATGATAAATTTGTGCAGTTTATAAGTGATTTGCACAATGAAATTTTGAGGCTGGAGTTTGTTCATTATGACTTCAAATCTCGAAGAACTATATCGGCCAAGGATTTCGCACACTCCATAGTTGCTTCTGCAGACGTGAGTCATCTGAGCAAGTTACTTGACCGAGTTGATGAATTGAACAATAATCCACAGTTCCAAAACATGTGCATCACATATGAGGAGTTCAAAAAATTTGCAGAACTGCGAAAAAAATTAGTACTACTTTCATTGGCTCTTTTCAGTTTTACAAAAGTAAATGGCCTTTTAACAAGAGATGATTTTCGACGTGCTGCATCAAGTGTTTGCGGTTTATCTATCTCTGACAACGTGGTGGAGATAGTTTTCCATTTGTTTGACACAAGTGGGGATGGAAATCTAAGCTCAAATGAGTTTGTTAGAGTGCTACACATGCGAGAGAATGATGTAGGTCGATCAGTGGAGACAGGACTCATGGGTTTCTTGTCTTGCTGCTGGATCTGTACAAAACAACCAAAATGA 1086 0.3867 MQHFRTSTPQFSSPAPSLPNPNPPKYPKLVSALVLGSALALLYYFSKPNIFPPNSSHSFFTKLSLPEFTNNNLLFRDAYRSKVFFNYEKRIRLHSPPEKLFQFFLHLNQTSYLFLVTLLSIPESSFSAVFKMFDMDNDGEIDKEEFKRVMASMRQTGQKDNASAENGSMMEYLFGKDGKGRLRHDKFVQFISDLHNEILRLEFVHYDFKSRRTISAKDFAHSIVASADVSHLSKLLDRVDELNNNPQFQNMCITYEEFKKFAELRKKLVLLSLALFSFTKVNGLLTRDDFRRAASSVCGLSISDNVVEIVFHLFDTSGDGNLSSNEFVRVLHMRENDVGRSVETGLMGFLSCCWICTKQPK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02934 361 Pfam EF-hand domain pair 283 332 IPR002048 GO:0005509
Car05g02934 361 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 2 105 IPR039800 GO:0005509|GO:0006851
Car05g02934 361 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 111 358 IPR039800 GO:0005509|GO:0006851
Car05g02934 361 CDD EFh_MICU 126 334 - -
Car05g02934 361 PANTHER CALCIUM-BINDING EF HAND PROTEIN 2 105 - -
Car05g02934 361 PANTHER CALCIUM-BINDING EF HAND PROTEIN 111 358 - -
Car05g02934 361 SUPERFAMILY EF-hand 126 263 IPR011992 -
Car05g02934 361 ProSiteProfiles EF-hand calcium-binding domain profile. 121 156 IPR002048 GO:0005509
Car05g02934 361 Gene3D - 120 156 - -
Car05g02934 361 ProSitePatterns EF-hand calcium-binding domain. 315 327 IPR018247 -
Car05g02934 361 ProSitePatterns EF-hand calcium-binding domain. 134 146 IPR018247 -
Car05g02934 361 Gene3D - 279 343 - -
Car05g02934 361 Pfam EF hand 127 153 IPR002048 GO:0005509
Car05g02934 361 Gene3D - 157 272 - -
Car05g02934 361 SUPERFAMILY EF-hand 252 332 IPR011992 -
Car05g02934 361 ProSiteProfiles EF-hand calcium-binding domain profile. 302 337 IPR002048 GO:0005509
Car05g02934 361 SMART efh_1 306 334 IPR002048 GO:0005509
Car05g02934 361 SMART efh_1 125 153 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02934 Car-Chr5 74340834 74343491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02934 28 299 EF-hand Containing Proteins AT4G32060 42.781 6.28e-85 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02934 K22827 - gmx:100786375 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03197 04 60323878 60334153 Car05g02934 05 74340834 74343491 PCT