LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car05g02924	ATGTTTTTTAAACTTGTAACAGGACCACGGAAAACTAAACCAGGCACCGTTCCTGTTTACCTTAATGTCTACGACCTCACACCGATTAATGGCTATGCTTATTGGCTTGGCCTTGGTGTCTACCATTCAGGGGTTCAAGTTCATGATATTGAATATGGTTTTGGAGCACATGAAAATGACACAACTGGAATTTTTGAAGTGCAACCGAAAAACTGTCCAGGTTTCACTTTCAGAAAATCAATTTTCATTGGAACTACAGATTTAGGTCCAAGAGATGTTAGGGCACTTATGGAGAAACTAGCTCAAGAGTATTCTGGAAACTCTTATCATCTCATCTCCAAAAATTGCAACCACTTCTGTCATGATGTTTGTCTCAAATTAACTGGAAAGTCAATTCCTAGATGGGTAAATCGACTTGCTAGACTTGGTTTATTTTGCAACTGTGTTCTCCCCCCTGGCTTAAATGAAACAAAGGTTCGGCACATTTCATCCGACAAGGTACAAGAAGGAGAAAAGAGGAAAATGAGAAGTCATTCCAATCCTCAAGGTTCATCAAGACAGTGCCTTCCTCCATCAACTTTGATCAAAGCTTCTTCaacatcaacattaacagtaaagtaa	621	0.3816	MFFKLVTGPRKTKPGTVPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHDIEYGFGAHENDTTGIFEVQPKNCPGFTFRKSIFIGTTDLGPRDVRALMEKLAQEYSGNSYHLISKNCNHFCHDVCLKLTGKSIPRWVNRLARLGLFCNCVLPPGLNETKVRHISSDKVQEGEKRKMRSHSNPQGSSRQCLPPSTLIKASSTSTLTVK	206

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car05g02924	206	MobiDBLite	consensus disorder prediction	165	206	-	-
	Car05g02924	206	ProSiteProfiles	PPPDE domain profile.	17	154	IPR008580	GO:0008233
	Car05g02924	206	Pfam	PPPDE putative peptidase domain	18	151	IPR008580	GO:0008233
	Car05g02924	206	PANTHER	THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED	3	204	-	-
	Car05g02924	206	MobiDBLite	consensus disorder prediction	180	206	-	-
	Car05g02924	206	SMART	DUF862_2a	17	155	IPR008580	GO:0008233
	Car05g02924	206	Gene3D	PPPDE domains	13	173	IPR042266	-
	Car05g02924	206	PANTHER	DESUMOYLATING ISOPEPTIDASE	3	204	IPR008580	GO:0008233

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car05g02924	Car-Chr5	74214866	74218058	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car05g02924	K22763		-	gmx:100306675	353.984

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car04g03213	04	60508098	60511527	Car05g02924	05	74214866	74218058	PCT