Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03213 ATGCTGTGTAATTTGGTTCCGTTGTCGCGGAAGAAAAAACCCGGTTCGGTTCCGGTTCACATCAACGTCTATGATCTCACCCCAATTAACGGTTATGCTTATTGGCTTGGCCTGGGTATTTATCATTCTGGTGTTCAAGTTCACGGTGTTGAATATGGATTTGGAGCACATGAACGTGACACTACTGGAATTTTTGAAGTGGAACCTAGACATTGTCCAGGATTCACTTTTAGAAAATCAATCTATATTGGATCAACAGATATGGGGCCGAACGAGGTTCGCGAGTTGATGGAAAAGCTAGCTGAAGAGTATGCTGGGACTACCTACCATCTTATACAAAAGAATTGCAACCATTTCTGTAATGATGTTTGTGTCAAATTAACTGGAAAGTCGATTCCTCGATGGGTTAATAGACTCGCGAGACTTGGTTTTTTCTGCAACTGCGTTCTTCCACCTAGCCTAAATGAATCAAAGGTTGGACAAGTTACATTAGACAAGGTTCAACAAGGAGACAAGAAGAAAATGAGAAGTCAGTCCCGGAAGTTAGATGATTCCTCTAATCCTCCATTGTCTGTTAGTCAAAGACATTGCCTTCCTCCATCTTCGACTGTAATTAATGCTTCCTCATCGTCAACCTTAACAGTAAAGTAA 651 0.4132 MLCNLVPLSRKKKPGSVPVHINVYDLTPINGYAYWLGLGIYHSGVQVHGVEYGFGAHERDTTGIFEVEPRHCPGFTFRKSIYIGSTDMGPNEVRELMEKLAEEYAGTTYHLIQKNCNHFCNDVCVKLTGKSIPRWVNRLARLGFFCNCVLPPSLNESKVGQVTLDKVQQGDKKKMRSQSRKLDDSSNPPLSVSQRHCLPPSSTVINASSSSTLTVK 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03213 216 Gene3D PPPDE domains 12 173 IPR042266 -
Car04g03213 216 MobiDBLite consensus disorder prediction 182 216 - -
Car04g03213 216 MobiDBLite consensus disorder prediction 167 181 - -
Car04g03213 216 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Car04g03213 216 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Car04g03213 216 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Car04g03213 216 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 214 - -
Car04g03213 216 PANTHER DESUMOYLATING ISOPEPTIDASE 2 214 IPR008580 GO:0008233
Car04g03213 216 MobiDBLite consensus disorder prediction 166 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03213 Car-Chr4 60508098 60511527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03213 K22763 - gmx:100786432 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03213 04 60508098 60511527 Car05g02924 05 74214866 74218058 PCT