Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02865 ATGGCTTCTGCTTCTGTTGCAACGGCTTTACCCCTGAGGTCTGCTACACAGAACAGTCTGAAAAGGCCATCATCTGAATCATTTTTCAGGCCGTTACCAGTAAAACAACCAAAGAGGGTCACACATTCAAAATCCAAGCTTGAAATTCATGCATCTTTGAAACAGAAGGCAGTGACAGGACTTACAGCAGCATCCTTGACAGCTTCCATGGTTATACCGGAGGTGGCTCATGCAGCTGGATCTGATCTCTCACCATCTCTTCAGAACTTTCTACTAAGCATTTTTGCTGGTGGAGCTGTGCTAACAGCTATATTTGGAGCTGTTTTTGGAGTAGCCAACTTTGATCCGGTTAAAAGAGCTTAA 363 0.4435 MASASVATALPLRSATQNSLKRPSSESFFRPLPVKQPKRVTHSKSKLEIHASLKQKAVTGLTAASLTASMVIPEVAHAAGSDLSPSLQNFLLSIFAGGAVLTAIFGAVFGVANFDPVKRA 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02865 120 PANTHER EXPRESSED PROTEIN 1 119 - -
Car05g02865 120 Gene3D Single helix bin 83 120 - -
Car05g02865 120 Pfam Photosystem II reaction centre X protein (PsbX) 84 119 IPR009518 GO:0009523|GO:0015979|GO:0016020
Car05g02865 120 PANTHER OS07G0673550 PROTEIN 1 119 - -
Car05g02865 120 MobiDBLite consensus disorder prediction 14 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02865 Car-Chr5 73629815 73630640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02865 - - aprc:113864756 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02865 05 73629815 73630640 Car05g02865 05 73629815 73630640 ECH
Car05g02865 05 73629815 73630640 Car04g03275 04 61167269 61167640 ECH