Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03275 ATGGCTTCTGCTTCTGTTTCAATGTCTTTACCACTAACCCAAGCCACCCACAAAAACCTTTCCAATCCCTTCTTGAAACCATCATTACCCTTTCCACAAGCAAAGAAGACAACAATAGTAAACAATTCAACCTCAAAATCCAAACTTGTTGGAATTGAAGCATCATTGAAGGACAAAACAGTGAAGGGTCTATCAGCTATTGCATTAACAGCTTCAATGGTGATTCCAGAAGTGGCTAATGCAGCTGGAAATGATTTCTCTCCATCTCTTAAAAACTTTTTGCTTAGCATTGCAGCTGGTGGTGTTGTTCTTACTGCCATATTAGGTGCTGTTATTGGTGTTTCCAACTTTGATCCTGTTAAGAGGACTTAA 372 0.3925 MASASVSMSLPLTQATHKNLSNPFLKPSLPFPQAKKTTIVNNSTSKSKLVGIEASLKDKTVKGLSAIALTASMVIPEVANAAGNDFSPSLKNFLLSIAAGGVVLTAILGAVIGVSNFDPVKRT 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03275 123 Gene3D Single helix bin 86 123 - -
Car04g03275 123 PANTHER OS07G0673550 PROTEIN 2 123 - -
Car04g03275 123 Pfam Photosystem II reaction centre X protein (PsbX) 87 122 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03275 Car-Chr4 61167269 61167640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03275 - - mtr:MTR_1g015290 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03275 04 61167269 61167640 Car04g03275 04 61167269 61167640 ECH
Car05g02865 05 73629815 73630640 Car04g03275 04 61167269 61167640 ECH