Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02815 ATGGTGGACCCCTACTATGCCTTTGGATTCATCATATGCTCCATCCTCACCATCCTCGCCTTCTACAATTTTCTTTTCTCAAAGAATAACCATTCCGATGCTACCACTTCCACCATCACGGAGAACATTACAACCGCCACCGGTCAATGTAGATCTTTCAATCCAAACGGTGACGTTGATATCATTATTGTTGGAGCTGGTGTTGCTGGTTCCGCTCTCGCTTACACTCTCGGCAAGGATGGACGTCGAGTTCTTGTTATTGAAAGAGATCTGAATGAACCAGACCGAATTGTTGGAGAATTGCTACAACCTGGAGGCTATCTCAAATTGATTGAGCTGGGACTTGAAGATTGTGTGGAGAAAATTGATGCTCAGCAAGTGTTCGGGTATGCTCTTTTCAAGGATGGGAAACACACTCGACTCTCTTATCCATTGGAAAAGTTTCACTCAGATATCGCTGGCAGAAGCTTTCACAATGGGCGTTTTATTCAGAGGATGAGAGAGAAGGCTGCCTCCCTTCCCAATGTGCAATTGGAGCAAGGAACAGTCACTTCACTGCTTGAAGAGAACGGTACAATTAAAGGGGTACAGTACAAAACAAAAGATGCTCAGGAATTATCCGCATGTGCACCTCTTACCATTGTTTGTGATGGCTGTTTCTCAAACTTGCGCCGTTCTCTTTGTAATCCTAAGGTAGAAGTTCCCTCTTGTTTTGTTGGCTTAGTTTTGGAAAACTGTGAACTTCCATGTGCAAATCATGGCCACGTCATACTGGGAGATCCTTCGCCGGTTCTGTTTTATCCCATAAGTAGTACAGAAGTTCGTTGTCTGGTTGATGTTCCTGGTCAGAAGGTTCCATCTATTTCCAATGGTGAAATGGCGAAGTATTTGAAGACAGTGGTAGCTCCACAGGTACCCCCTGAGATTCATGATTCTTTCATAGCTGCAGTGGACAAAGGCAACATAAGGACAATGCCAAACAGAAGCATGCCAGCCGCTCCTTATCCTACTCCGGGAGCCCTTCTGATGGGAGACGCATTCAACATGCGCCATCCCCTAACTGGGGGCGGGATGACTGTGGCATTATCTGATATCGTAGTGCTGCGAAATCTTCTCAAGCCTTTGCATGATCTGACTGATGCACCTAGCCTTTGCAAATACCTTGAGTCCTTCTATACCTTGCGTAAGCCAGTTGCATCCACCATAAATACATTGGCAGGAGCACTTTACAAGGTTTTTTGCGCATCACCTGATCCAGCAAGGAAAGAAATGCGTCAAGCTTGCTTTGATTATCTGAGTCTCGGCGGTTTATTCTCAGAAGGACCAGTCTCTTTGCTTTCAGGATTAAACCCTCGGCCCCTGAGCTTGGTTCTTCATTTCTTCGCTGTTGCGATATATGGTGTTGGTCGTTTATTGCTACCATTTCCTTCCCCTAAACGCTTATGGATTGGAATCCGATTAATTTCTAGTGCATCTGGAATCATCTTGCCCATAATTAAGGCAGAAGGAGTCCGGCAAATGTTCTTTCCTGCAACTGTTCCAGCTTATTACAGAGCTCCTCCAGCTACATAA 1572 0.4529 MVDPYYAFGFIICSILTILAFYNFLFSKNNHSDATTSTITENITTATGQCRSFNPNGDVDIIIVGAGVAGSALAYTLGKDGRRVLVIERDLNEPDRIVGELLQPGGYLKLIELGLEDCVEKIDAQQVFGYALFKDGKHTRLSYPLEKFHSDIAGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLLEENGTIKGVQYKTKDAQELSACAPLTIVCDGCFSNLRRSLCNPKVEVPSCFVGLVLENCELPCANHGHVILGDPSPVLFYPISSTEVRCLVDVPGQKVPSISNGEMAKYLKTVVAPQVPPEIHDSFIAAVDKGNIRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDLTDAPSLCKYLESFYTLRKPVASTINTLAGALYKVFCASPDPARKEMRQACFDYLSLGGLFSEGPVSLLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRLWIGIRLISSASGIILPIIKAEGVRQMFFPATVPAYYRAPPAT 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02815 523 PANTHER SQUALENE MONOOXYGENASE-RELATED 1 522 - -
Car05g02815 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 60 82 - -
Car05g02815 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 209 224 - -
Car05g02815 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 337 352 - -
Car05g02815 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 352 368 - -
Car05g02815 523 Pfam Squalene epoxidase 210 482 IPR013698 GO:0004506|GO:0016021|GO:0050660
Car05g02815 523 Gene3D - 52 427 IPR036188 -
Car05g02815 523 SUPERFAMILY FAD/NAD(P)-binding domain 58 434 IPR036188 -
Car05g02815 523 PANTHER SQUALENE MONOOXYGENASE 1 522 IPR040125 GO:0004506|GO:0016126
Car05g02815 523 Pfam NAD(P)-binding Rossmann-like domain 63 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02815 Car-Chr5 73219399 73225554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02815 19 521 Miscellaneous Gene Families AT1G58440 78.389 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02815 K00511 - gmx:100820031 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02815 05 73219399 73225554 Car05g02815 05 73219399 73225554 ECH
Car04g03350 04 61979564 61983733 Car05g02815 05 73219399 73225554 PCT