Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02637 ATGGAATTGGACAGGGGATTTGCAGGAGAGCGAACAGTGAAATCATTGCGTCTTTCAAAGGCCCTGACAGTACCCGAAACAACAACTGTCTATGAAGCTTGTCGTCGGATGGCTGCTCGTAGGGTGGATGCTCTATTACTAACTGATTCTAATGCTTTGCTTTGTGGAATCCTCACAGACAAGGATATAGCAACCAAAGTTGTTGCCCGAGAGATTAATCCTGAAGAAACACCTGTTTCCAAGGTTATGACAAGGAATCCTGTATTTGTCCTTTCTGAAACTCTTGCAGTGGAAGCCCTCCAAAAGATGGTGCTAGGGAAATTCAGGCATCTACCGGTGGTGGAGAATGGAGAAGTTTTGGCTTTACTCGACATAGCAAAATGTTTGTATGATGCCATTGCACGTATGGAAAGGGCTGCTGAGAAAGGAAAAGCAATTGCAGCAGCTGTTGAAGGAGTTGAAAAACACTGGGGATCATCCAATTCTGACTCTAATTCATCATTCATTGAAGCTATTCGGGAACAGATATTCAAACCATCATTGTCCACAATCATTCCTGAGAATTCAAAgacggtaacagttttgccaacagattcgattttgaaaacaacaaagaagaTGGTTGAACTTCATGCAAGTTGTGCTGTTGTTACTGTTGATGGCAAACCTCTAGGCATCTTGACTTCAAGGGATATCTTGATGCGGGTAATTGGACAAAATCTTCTGCCAGCATCAACTCCTGTTGAGAAGGTCATGACTCCAAATCCAGAATGTGCAGTAATTGATACAGCAATTGTCGATGCACTTCATACAATGCATGATGGAAAATTTTTACATCTTCCGGTGGTTGATAGAGATGGCATTGTAGTCGCTGTGGTCGATGTGATTCATGTGACTCATGCTGCTGTGGCTACAGTTAGTCAGGTCGGAAACAACGAAGCTGCTACCTCCTTGATGCAAAGATTTTGGGATTCAGCCATGACCTTGCCTCCAACTGATGATGACGACGAAAATCGAAGTGAAAGTTCCTGCAAAATAGGTTCTGATGGAGGAGACACGGGGAGATCCGTTCCTTATATATCAGCAGGCATGCCCAATACATTTTCCTTCAAAGTACAAGATAAGAAAGGAAGAATGCATAGATTCACATGTGATACCCGGAGCATGACGGAGGTTATCACTTCAATCCTTCAGAGACTTGGTGCTGATATTGACCCTAACAATCTGCCTCATATTCTGTATGAAGATGAAGATCACGATAAAGTTGTATTGGCTTCAGACAGTGATCTTGCCGCAGCTGTGGACCATGCAAGGACGGCTGGCTTGAAGGGATTGAAATTGTATTTAGACTACGAAGGAACGGGCGGTCACAGGAAAGGTTCACATTCAGGAAGTTTAGAGCTTGCGAGTACAGATGCATGGGCTTCAGCATATAGtgctgttgctgcgggagctgctcttgctgctgGCTTAGGCCTATTAACATACTTGAAGCGAACTTGA 1503 0.4132 MELDRGFAGERTVKSLRLSKALTVPETTTVYEACRRMAARRVDALLLTDSNALLCGILTDKDIATKVVAREINPEETPVSKVMTRNPVFVLSETLAVEALQKMVLGKFRHLPVVENGEVLALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGSSNSDSNSSFIEAIREQIFKPSLSTIIPENSKTVTVLPTDSILKTTKKMVELHASCAVVTVDGKPLGILTSRDILMRVIGQNLLPASTPVEKVMTPNPECAVIDTAIVDALHTMHDGKFLHLPVVDRDGIVVAVVDVIHVTHAAVATVSQVGNNEAATSLMQRFWDSAMTLPPTDDDDENRSESSCKIGSDGGDTGRSVPYISAGMPNTFSFKVQDKKGRMHRFTCDTRSMTEVITSILQRLGADIDPNNLPHILYEDEDHDKVVLASDSDLAAAVDHARTAGLKGLKLYLDYEGTGGHRKGSHSGSLELASTDAWASAYSAVAAGAALAAGLGLLTYLKRT 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02637 500 ProSiteProfiles CBS domain profile. 184 245 IPR000644 -
Car05g02637 500 ProSiteProfiles CBS domain profile. 17 75 IPR000644 -
Car05g02637 500 CDD PB1_MUG70 368 451 - -
Car05g02637 500 ProSiteProfiles CBS domain profile. 252 313 IPR000644 -
Car05g02637 500 SUPERFAMILY CAD & PB1 domains 361 453 - -
Car05g02637 500 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 6 488 - -
Car05g02637 500 CDD CBS_pair_MUG70_1 18 134 - -
Car05g02637 500 ProSiteProfiles CBS domain profile. 83 141 IPR000644 -
Car05g02637 500 Pfam PB1 domain 367 450 IPR000270 GO:0005515
Car05g02637 500 PANTHER CBS/OCTICOSAPEPTIDE/PHOX/BEMP1 (PB1) DOMAIN PROTEIN 6 488 - -
Car05g02637 500 Pfam CBS domain 248 298 IPR000644 -
Car05g02637 500 Pfam CBS domain 79 122 IPR000644 -
Car05g02637 500 Pfam CBS domain 19 67 IPR000644 -
Car05g02637 500 Pfam CBS domain 189 235 IPR000644 -
Car05g02637 500 Gene3D - 7 148 IPR046342 -
Car05g02637 500 Gene3D - 159 314 IPR046342 -
Car05g02637 500 SUPERFAMILY CBS-domain pair 190 301 IPR046342 -
Car05g02637 500 SMART PB1_new 367 452 IPR000270 GO:0005515
Car05g02637 500 ProSiteProfiles PB1 domain profile. 365 452 IPR000270 GO:0005515
Car05g02637 500 SMART cbs_1 255 303 IPR000644 -
Car05g02637 500 SMART cbs_1 190 237 IPR000644 -
Car05g02637 500 SMART cbs_1 86 130 IPR000644 -
Car05g02637 500 SMART cbs_1 20 68 IPR000644 -
Car05g02637 500 MobiDBLite consensus disorder prediction 326 358 - -
Car05g02637 500 SUPERFAMILY CBS-domain pair 10 126 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02637 Car-Chr5 71390392 71397349 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02637 - - gmx:100785816 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02637 05 71390392 71397349 Car05g02637 05 71390392 71397349 ECH
Car05g02637 05 71390392 71397349 Car06g00555 06 5597222 5603183 PCT