Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02224 ATGGTTGGGAAGGATAATCTGAGGACTGAGGATTTGAACTTGTGCTTTGAGAATCTTATGATGGTTGCTGGTGGTGGGAAAGGAGGGTACATGAAGGCTGGTGTTATCACTGAATGGAAGGATATTCCTGTGGAGCTTTTGATGCAAATTCTTTCCCTTGTGGATGATCAGACGGTGATTAAAGCTTCTGGTGTTTGTCGTGGTTGGAGAGATTCTATTTTCTTTGGCCTTGCTCGTTTATCACTCTCATGGTGTAGCAAGAACATGAACAACTTGGTCCTATCTCTTGTTCCTAAGTTTGCAAAATTGCAAACTCTAATCCTTCGTCAAGATAAGCCTCAACTAGACGATAATGCTGTAGGGACTATTTCAAATTTCTGCCATGAACTGCAGATTCTAGACCTCAGTAAAAGCTTCAAGCTCACTGATAGGTCACTGTATGCAATAGCGCATGGTTGTCACGATCTTACAAAACTTAACATCAGTGGATGTTCAGCATTTAGTGATAATGCTCTGACTTACCTTGCCGGTTTCTGTAGAAAACTCAAAGTTCTTAATCTCTGTGGATGTGTTAGAGCAGCATCTGATACTGCACTACAGGCTATTGGACACTACTGCAATCAGTTGCAGTCTCTGAACCTTGGATGGTGTGATAAAGTTGGTGATGTTGGAGTGATGAGTTTGGCTTATGGCTGTCCTGATCTTAGAACAGTTGACTTGTGTGGCTGTGTCCATATAACAGGTATTTTACTTCAATATTTCATTACCTCAAATTTGGAAAAACATGTTAGTTTTGTGAGGTTAGCAAAAAAAGTGCATTTACACACATTCAATGGAGGTGGTTAG 846 0.4066 MVGKDNLRTEDLNLCFENLMMVAGGGKGGYMKAGVITEWKDIPVELLMQILSLVDDQTVIKASGVCRGWRDSIFFGLARLSLSWCSKNMNNLVLSLVPKFAKLQTLILRQDKPQLDDNAVGTISNFCHELQILDLSKSFKLTDRSLYAIAHGCHDLTKLNISGCSAFSDNALTYLAGFCRKLKVLNLCGCVRAASDTALQAIGHYCNQLQSLNLGWCDKVGDVGVMSLAYGCPDLRTVDLCGCVHITGILLQYFITSNLEKHVSFVRLAKKVHLHTFNGGG 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02224 281 Gene3D Ribonuclease Inhibitor 34 277 IPR032675 -
Car05g02224 281 Pfam Leucine Rich repeat 206 229 IPR001611 GO:0005515
Car05g02224 281 SUPERFAMILY F-box domain 38 72 IPR036047 GO:0005515
Car05g02224 281 Pfam F-box-like 40 73 IPR001810 GO:0005515
Car05g02224 281 SMART LRR_CC_2 127 152 IPR006553 -
Car05g02224 281 SMART LRR_CC_2 153 178 IPR006553 -
Car05g02224 281 SMART LRR_CC_2 206 231 IPR006553 -
Car05g02224 281 SMART LRR_CC_2 74 99 IPR006553 -
Car05g02224 281 SMART LRR_CC_2 179 205 IPR006553 -
Car05g02224 281 SMART LRR_CC_2 232 257 IPR006553 -
Car05g02224 281 SUPERFAMILY RNI-like 74 255 - -
Car05g02224 281 PANTHER UNCHARACTERIZED 1 247 - -
Car05g02224 281 PANTHER F-BOX SKP2A-LIKE PROTEIN 1 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02224 Car-Chr5 67446115 67449651 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02224 K03875 - gmx:100797840 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02935 04 56536332 56539091 Car05g02224 05 67446115 67449651 PCT