Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02935 ATGAACAATTTGGTCCTATCTTTTGCTCCTAAGTTCACAAATTTGCAAACTCTGATCCTTCGTCAAGACAAGCCTCAACTAGAGGACAATGCTGTCAAGAGTGTTGCGAAATTCTGTCGCGACCTGCAGATCCTGGACCTCAGCAAAAGTTTCAAGCTTACCGATCGTTCGCTGTATGCGATAGCCCTTGGTTGTCGCGATCTTACAAAACTGAACATTAGTGGTTGTTCATCCTTTAGTGACAATGCTCTTGCTTACCTAGCCAGTTTATGCAGAAAGCTGAAAGTTTTGAATCTATGTGGTTGTGTTAAATCTGTATCAGATACCACATTACAGGCAATTGGACATTACTGCAATCAGTTACAGTCTTTGAACCTTGGATGGTGTGAACAAGTCAGCAATGTCGGGGTGATGAGTTTAGCATATGGATGCCCTGATCTTAGAACACTTGATTTATGTGGCTGTGTCCTTATAACAGATGATAGCGTCATAGCCTTGGCAGACAGGTGTCCTCATCTGAGGTCCCTTGGTCTGTACTTCTGCAAAAACATAACAGACAGAGCAATGTATTCATTGGCACAAAGCAAAGTGAATAACAGGATGTGGGGGGGATCGGTGAACGGTGAAAATGACGAGGATGGTCTAAGGACTTTGAACATTAGCCAGTGTACAGCACTCACCCCTTCTGCTGTTCAAGCTGTCTGTGACTCTTCTCCTGCACTTCACACCTGCTCAACAAGACATTCACTCATCATCAGTGGCTGTCTTAATCTTACATCTGTGCATTGTGCTTGTTGTGTCCGGCCGCACCGTGCTATAAGCACTTATGCTCACTCAGCTCATTGA 846 0.4433 MNNLVLSFAPKFTNLQTLILRQDKPQLEDNAVKSVAKFCRDLQILDLSKSFKLTDRSLYAIALGCRDLTKLNISGCSSFSDNALAYLASLCRKLKVLNLCGCVKSVSDTTLQAIGHYCNQLQSLNLGWCEQVSNVGVMSLAYGCPDLRTLDLCGCVLITDDSVIALADRCPHLRSLGLYFCKNITDRAMYSLAQSKVNNRMWGGSVNGENDEDGLRTLNISQCTALTPSAVQAVCDSSPALHTCSTRHSLIISGCLNLTSVHCACCVRPHRAISTYAHSAH 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02935 281 Pfam Leucine Rich repeat 118 141 IPR001611 GO:0005515
Car04g02935 281 Pfam Leucine Rich repeat 144 167 IPR001611 GO:0005515
Car04g02935 281 Pfam Leucine Rich repeat 170 193 IPR001611 GO:0005515
Car04g02935 281 SMART LRR_CC_2 12 38 IPR006553 -
Car04g02935 281 SMART LRR_CC_2 118 143 IPR006553 -
Car04g02935 281 SMART LRR_CC_2 144 169 IPR006553 -
Car04g02935 281 SMART LRR_CC_2 65 90 IPR006553 -
Car04g02935 281 SMART LRR_CC_2 91 117 IPR006553 -
Car04g02935 281 SMART LRR_CC_2 212 237 IPR006553 -
Car04g02935 281 SMART LRR_CC_2 170 195 IPR006553 -
Car04g02935 281 SMART LRR_CC_2 39 64 IPR006553 -
Car04g02935 281 PANTHER UNCHARACTERIZED 1 263 - -
Car04g02935 281 SUPERFAMILY RNI-like 4 262 - -
Car04g02935 281 Gene3D Ribonuclease Inhibitor 2 213 IPR032675 -
Car04g02935 281 PANTHER F-BOX SKP2A-LIKE PROTEIN 1 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02935 Car-Chr4 56536332 56539091 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02935 K03875 - gmx:100793275 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02935 04 56536332 56539091 Car04g02935 04 56536332 56539091 ECH
Car04g02935 04 56536332 56539091 Car05g02224 05 67446115 67449651 PCT