Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02101 ATGGGGAGAGGCAAAGGAGGGAAGAGCCGTACTCAGAGGAAGCATTTTCAGCAAAACAGAGAAAATGTTTGGAAGCAACCGCGTCCAGAATCACTTCCTTCCACCACAAATCTTTTCGATATTCAAAACCCCGATTTCGATCAATATTACAAGGAGCAGAACATTGTGTCCCTCCAAGAATGGGATTCATTTGTGCAAGTTCTCAGAACTCCATTGCCTGCAGCATTTAGAATCAATTCCAGTAGCCGGTTTCATGCTGATATTCGGTCCCAACTGGAAAATGACTTTGCACCTGCTCTTCAGGCTATCGTTGTTGAAAGGGATGAAGAGAATGCTATTAGACCTTTGCCATGGTATCCTGAGAATCTTGCTTGGCATTCTAATTTTTCCCGTATGCAGCTCAGGAAGAATCAAGCACTTCGGAGGTTTCATGAATTCTTAAAGGTAGAAAATGAAATTGGAAATATTACAAGACAGGAAGCTGTCAGCATGGTACCTCCTCTGTTCTTAGATGTACATTCAAATCATATTGTACTTGATATGTGTGCTGCACCGGGTTCAAAAACATTCCAATTGCTTGAGATTTTACACCAATCAACTACAGCAGGATCACTGCCTGATGGAATGGTTGTAGCAAATGATCTAGATGTGCAAAGATGTAATCTTCTCATCCACCAAATAAAACGAACATGCACAGCAAACCTAATTGTCACAAACCATGAAGCTCAGCACTTCCCAGGATGTTGTTTAAACAGGCATTATGATAAAATGGGTCCAGATCAGCAGGCTTCCGAATTGTTATTTGACCGTGTTCTGTGTGATGTACCATGCAGTGGAGATGGTACCCTCCGCAAGGCACCTGATCTTTGGAGGAGATGGAACACAGGGACAGGAAATGGGCTTCACAACCTACAAATTTTAGTTGCCATGCAAGGCCTATCTTTACTTAAAGTTGGTGGAAGAATGGTTTATTCAACCTGCTCAATGAATCCTATTGAAAATGAAGCTGTTGTTGCAGAGGTTTTACGGAGGTGTGGAGGGTCCGTTGAACTTGTTGATGTTTCCAGTGAGCTTCCCCAACTTATTCGTCGGCCAGGTCTGAAGAGATGGAAGGTATGTGACAAGGGCAAGTCGTTGGTTTCCTGTAAAGAGGTTCCCAAGGATCGTAGAAGTGTTGTTCTTCCCAGCATGTTTCTGAATGGCGGAAGCTATCGAGATATTGACTGTAACAGAATTTGCGATGTTAATGGAGATTCTGAAGATGGTGTTCAAGCAGTGTATCCTTTGATGCACGAGTTTACTGAGGAAGTTTCTGATTTTCCACTAGAGCGATGCATGCGGTTGCTGCCCCATGATCAGAACTCTGGAGCTTTCTTTATAGCTGTATTGCAAAAGGTTTCTCCTCTGCCAGCAATTGAGGTAAAAACTAGAAAAGAAGTTGATAATCAGCATGTAGAATCAGTAAACCAGTGCAATGAGGACGCACAAGAATTGCAGAATAATCCATCAGAAAGTACACATGAAGTTCGGGAACAAATTTCCGAGGATGATAAAAATGAAACCAACAATGCAGATTTTAAATTGAGTCCTCTTATAGGTGAAGGGGATTCCAAGGAAGCCGAGGCGCCCCGTAATGTAGAAAACATAGCAAAGATCATTCCAAGCAAAAGAAAACTTCGGATACAAAGCAAATGGAGAGGTGTTGATCCTGTCGTCTTCTTCAAAGATGAAGTAATTATTAAGAACATAAAGGCATTTTATGGTATCCACGACCAGTTTCCATTAGATGGTCATCTTGTAACAAGAAACAGTGATACAAGCCATGTAAAAAGAATTTACTATGTctccaaggcagtcaagaatgttcttgagttgaaCTCAGTTGGGCAGCAACTTAAAATAACTTCTGTTGGCCTGAAAATTTTTGAAAGACAAACGTCGCGTGAAGGTAGATCTGTACAATGTGCTTTCCGGATCACTTCTGAAGGATTGCCCCTTATCCTCCCTCACATCACCAAACAGATTCTAAGTGCATCTCTTATAGATTTCAAGCATCTTCTGCAGTATAGAAATGTAAAATTTGCAGATTTTATCGATGCCAAGTTTGGTGAAATGGCAGCAAATCTAATGCCAGGCTGTTGTGTGGTAGTTCTGGGTGAAGGGAACAGAGACGAAGCAGAGGCCCTCAAGTTGGATGAATCATCAATAGCCATTGGATGCTGGAAGGGTGGGGCAAGTTTGACCGTGATGGTTACATCAATGGAATGTGAAGAACTGCTTGAAAGGCTTTTAATGCGTTCAGACAGGGTAACCGAAAAGGGATCCTCCATGCACGAGGACGAGCTGTCTAACAACGTAGGCAATGTAGAACAGGAGTCAGATGGTAACAGCAAAGATGTGGAAACTATTTGGTGTTAA 2418 0.4156 MGRGKGGKSRTQRKHFQQNRENVWKQPRPESLPSTTNLFDIQNPDFDQYYKEQNIVSLQEWDSFVQVLRTPLPAAFRINSSSRFHADIRSQLENDFAPALQAIVVERDEENAIRPLPWYPENLAWHSNFSRMQLRKNQALRRFHEFLKVENEIGNITRQEAVSMVPPLFLDVHSNHIVLDMCAAPGSKTFQLLEILHQSTTAGSLPDGMVVANDLDVQRCNLLIHQIKRTCTANLIVTNHEAQHFPGCCLNRHYDKMGPDQQASELLFDRVLCDVPCSGDGTLRKAPDLWRRWNTGTGNGLHNLQILVAMQGLSLLKVGGRMVYSTCSMNPIENEAVVAEVLRRCGGSVELVDVSSELPQLIRRPGLKRWKVCDKGKSLVSCKEVPKDRRSVVLPSMFLNGGSYRDIDCNRICDVNGDSEDGVQAVYPLMHEFTEEVSDFPLERCMRLLPHDQNSGAFFIAVLQKVSPLPAIEVKTRKEVDNQHVESVNQCNEDAQELQNNPSESTHEVREQISEDDKNETNNADFKLSPLIGEGDSKEAEAPRNVENIAKIIPSKRKLRIQSKWRGVDPVVFFKDEVIIKNIKAFYGIHDQFPLDGHLVTRNSDTSHVKRIYYVSKAVKNVLELNSVGQQLKITSVGLKIFERQTSREGRSVQCAFRITSEGLPLILPHITKQILSASLIDFKHLLQYRNVKFADFIDAKFGEMAANLMPGCCVVVLGEGNRDEAEALKLDESSIAIGCWKGGASLTVMVTSMECEELLERLLMRSDRVTEKGSSMHEDELSNNVGNVEQESDGNSKDVETIWC 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02101 805 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 48 466 IPR029063 -
Car05g02101 805 PANTHER TRNA (CYTOSINE(34)-C(5))-METHYLTRANSFERASE-RELATED 1 779 - -
Car05g02101 805 MobiDBLite consensus disorder prediction 508 523 - -
Car05g02101 805 PANTHER NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 1 779 IPR023267 GO:0001510
Car05g02101 805 PRINTS RNA (C5-cytosine) methyltransferase signature 179 189 IPR023267 GO:0001510
Car05g02101 805 PRINTS RNA (C5-cytosine) methyltransferase signature 269 281 IPR023267 GO:0001510
Car05g02101 805 PRINTS RNA (C5-cytosine) methyltransferase signature 319 335 IPR023267 GO:0001510
Car05g02101 805 PRINTS RNA (C5-cytosine) methyltransferase signature 448 465 IPR023267 GO:0001510
Car05g02101 805 MobiDBLite consensus disorder prediction 773 805 - -
Car05g02101 805 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 125 146 IPR023270 GO:0016428
Car05g02101 805 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 353 372 IPR023270 GO:0016428
Car05g02101 805 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 632 644 IPR023270 GO:0016428
Car05g02101 805 MobiDBLite consensus disorder prediction 490 507 - -
Car05g02101 805 Pfam 16S rRNA methyltransferase RsmB/F 169 353 IPR001678 GO:0008168
Car05g02101 805 Gene3D Vaccinia Virus protein VP39 40 465 IPR029063 -
Car05g02101 805 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 64 466 IPR001678 GO:0008168
Car05g02101 805 ProSitePatterns NOL1/NOP2/sun family signature. 268 279 IPR018314 GO:0003723|GO:0008168
Car05g02101 805 MobiDBLite consensus disorder prediction 490 542 - -
Car05g02101 805 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02101 Car-Chr5 66227788 66234961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02101 K15334 - gmx:100808598 1177.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02101 05 66227788 66234961 Car05g02101 05 66227788 66234961 ECH
Car06g00825 06 8074366 8082431 Car05g02101 05 66227788 66234961 PCT