Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02044 ATGCCTCCATCCTATTTCCCTCTTCGTTGGGAAAGCACAGGACAACAATGGTGGTTCGCATCACCAATTGATTACGCAGCAGCAAACGCTCTCTACGATCTCGTAATTGAACTTCTCCACTTAGACACCAACCTCCTCATCAAACTCACTTCCCTTCCCCGAATTCGTCGTCTCGAAACCGTTTGGGACGACGAATCGAACTTCGATGACGTGGCTAAATGCCGGTCCCACGTCGCCAAAAAACTCATGATCGAATGCGAAACTGGAAGAAGATGCCAAAAGAACTCTCTCATTCGTGCTGGTTATGGTGGATGGCTTCTTTACACTGCTGCTTCGGCTGGTGACGTGGATTTTGTTAAGGAATTGTTGGGAAGAGAACCTTCGCTTGTGTTTGGAGAAGGTGAGTATGGAGTTACGGATATATTGTATGCTGCAGCGAGGAGTAAAAATTGTGAGGTGTTTAAGATTCTGTTTGGTTATGCAATGTTGAAAAATAGTGGAGAGTTGGTTATGGAGGAGGTTTTTGAGAAGGATATGGTTAATAGAGGTGTTCATGCTGCTGCTAGAGGTGGAAATTGGGAGATACTCAAAGAGTTTGTTGGAAGTGTTGGTGATATTTTAGTATTTAGAGATTTTCATGGATGTACTGTTTTGCATACAGCAGCTGGTACAGGGCAAGTTGAGGTGGTGAGAAAGCTACTTGAGTCATTTGATATTATCAACCTAACAGATACTCAAGGAAATACTGCATTACATGTAGCTTGTTACAAGGGTTACTTACCTGTGGTAGAAATTCTGATACATGCATCTCCATCACTAGCATTGTTAACCAACCACCATGGAGATACTTTTCTTCATTTGGCAGTGGTTGGTTTCAATAGTCCTGGTTTCTGTAGACTAGACAAGCATACTCAACTCATGAAACAATTGGTGAGTGAAAAGATTGTGAAGACACAAGAGATCATCAATGTTAAGAACAATGATGGAAGAACTTGTCTTCATGTGTCTGTTATTGATGGCATTCAATGTGAGGTAGTGGAATTATTGATGTCTGTGCCATCAATTGATTTGAACATTTGTGATGCTGATGGTATGACACCTTTAGATCTTTTGAAGCAACGACCGCGATCGACGTCTTCTGATATTTTAATCAAACGGTTGGTTTCCGCAGGAGGGATCTCTAATTGTCAAGATGATATGGTAAGAGATATAAATTCTAAACTTAGCTCCGAATACTCTGAATCAAGTTGCAGCGTGCAGCAGCTGCAGAAGATCCAAATCCAGGTAAATGGAAGTAGTCCTGGGACTTCATTCAGAATACCGGATGCAGAGATATTCTTGTACACTGGAATTGAGAATGCATCTTATGTCAATTATGATCAAACAAGTATTGAATCATATTCATGCTCAAGTGAATTAAGCAATTCTGATGCTGCTAATTCCACATATAACAAGTCTAATAATAATTCTGTCAATTATGCTGCAAGACGCTTAAAGTTTCTTCTCAAGTGGCCTAGGAGAAAAGACACAAAAGAAGCTTTCAAAGAATTGGAAAACGATGATGATTCTCTTGATCCTTTAAGTACGAGTAGAAATTTAGAAGAGTTTTCAATTCCATTAAGGCAAAGATACTCACATTCATGCTCCCTCAGAACACAATCTATAAGGAGTTTTCATCCAAGTCCATCCTCCAAAATGAGTTTCACTGCAGGACTCATGCAAGGTGTAATTCAGCTAAAGCCACATGTCAATCTTCCAACTCATTCAAGTTCTAATCTTTTTCAAGAATTATCTTTAGTTTCTCTATCTAATTCGATCAACAAACAAAAGGGTCTTGATCAACAAGGTTCTTTCAATAAAAAATTGATGAATCAATATGTTTCTTTTGGAGCACAGGGAATGACCATGGAAGATTCAAATAGTTGCGAATCAAATGGGAGTTATAAGCGTTTCAGTTCTTTAGTTGCTTAA 1971 0.3932 MPPSYFPLRWESTGQQWWFASPIDYAAANALYDLVIELLHLDTNLLIKLTSLPRIRRLETVWDDESNFDDVAKCRSHVAKKLMIECETGRRCQKNSLIRAGYGGWLLYTAASAGDVDFVKELLGREPSLVFGEGEYGVTDILYAAARSKNCEVFKILFGYAMLKNSGELVMEEVFEKDMVNRGVHAAARGGNWEILKEFVGSVGDILVFRDFHGCTVLHTAAGTGQVEVVRKLLESFDIINLTDTQGNTALHVACYKGYLPVVEILIHASPSLALLTNHHGDTFLHLAVVGFNSPGFCRLDKHTQLMKQLVSEKIVKTQEIINVKNNDGRTCLHVSVIDGIQCEVVELLMSVPSIDLNICDADGMTPLDLLKQRPRSTSSDILIKRLVSAGGISNCQDDMVRDINSKLSSEYSESSCSVQQLQKIQIQVNGSSPGTSFRIPDAEIFLYTGIENASYVNYDQTSIESYSCSSELSNSDAANSTYNKSNNNSVNYAARRLKFLLKWPRRKDTKEAFKELENDDDSLDPLSTSRNLEEFSIPLRQRYSHSCSLRTQSIRSFHPSPSSKMSFTAGLMQGVIQLKPHVNLPTHSSSNLFQELSLVSLSNSINKQKGLDQQGSFNKKLMNQYVSFGAQGMTMEDSNSCESNGSYKRFSSLVA 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02044 656 Pfam Ankyrin repeats (3 copies) 185 268 IPR002110 GO:0005515
Car05g02044 656 Gene3D - 19 431 IPR036770 -
Car05g02044 656 SUPERFAMILY Ankyrin repeat 106 384 IPR036770 -
Car05g02044 656 ProSiteProfiles Ankyrin repeat region circular profile. 213 235 - -
Car05g02044 656 ProSiteProfiles Ankyrin repeat profile. 246 278 IPR002110 GO:0005515
Car05g02044 656 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 647 - -
Car05g02044 656 ProSiteProfiles Ankyrin repeat region circular profile. 246 267 - -
Car05g02044 656 ProSiteProfiles Ankyrin repeat profile. 213 245 IPR002110 GO:0005515
Car05g02044 656 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 647 - -
Car05g02044 656 SMART ANK_2a 179 208 IPR002110 GO:0005515
Car05g02044 656 SMART ANK_2a 328 359 IPR002110 GO:0005515
Car05g02044 656 SMART ANK_2a 102 131 IPR002110 GO:0005515
Car05g02044 656 SMART ANK_2a 363 396 IPR002110 GO:0005515
Car05g02044 656 SMART ANK_2a 213 242 IPR002110 GO:0005515
Car05g02044 656 SMART ANK_2a 18 47 IPR002110 GO:0005515
Car05g02044 656 SMART ANK_2a 280 319 IPR002110 GO:0005515
Car05g02044 656 SMART ANK_2a 246 275 IPR002110 GO:0005515
Car05g02044 656 SMART ANK_2a 136 166 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02044 Car-Chr5 65689500 65692614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02044 65 430 Miscellaneous Gene Families AT1G07710 26.385 6.52e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02044 - - gmx:100796359 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02044 05 65689500 65692614 Car06g01122 06 10892732 10895933 PCT