Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01619 ATGAATTCAAGGTGCAACTTGAATCCGGGTCTCGAGAGTTCAATGAAAACTGAAATAGAGGAAGCTTATGAAGGGGAAGATGAGCATGAAGATTCCCCCTCCATCAAGAGAGAGCTCTCTGATTTTGATCTCCAAGTTCATGATCCAACAGGTAAAGAGATTAACTACCCCAGTTTATATAAGAAACAAGCCAACATTCAATTGGAAGACAGAGACGATAAACACCTCCGAAAGAGTGTTGATTTAATCCAAAGTGGGCATGTCAGTGATCCTGGGATAGGCAAGTCTTACTTCTGGGCTTCTCCAAAGCTCAAGCGATCTTGCTCAAATCTGGAAAGAAGGGATATGCTTAGGAAGATAGCCGATCACTTTCCATCTTCAAAGTCACAGTCGTTTGAGGATTTGCAGGGATTATCAGCAAATCAGATGGAAAATCTAGAAAGCCCCAGGTCTGTGATGACTCATTGCAGTGCTGATAGAGTGATGTTGAAAAGGCGTTCCTCTAGCCAAGTTCTCCCTTCTGGAAGTAAAAAATTGTGGTGGAAGTTGTTTCTCTGGAGCCACAGGAACATTCATCAACCATGGGTCAGCAAATCAACACAATTACACCCTGCAAGTGCTGTTTTAAACAGTCAATGCGGGTACTCTTCAGACATCCTGGAACCAAAACAAGGTAAGACATTGAAACATGTGGGATCACCCTCTCCTGCGTCACCTTCTGGGGAGTACTTTAGCAAAAGCGGCAAGGATAAAAATATTGACAATCAAAAGTGGAGCAGATTTCACAAAGAAAACTTTGATTTTTGTACACAAAATCAATGGGTAGCTTTCTCAACAGAATCAACCTCCTTCAACAGAGTAGATGAGTGGGTGAAAGATCTTGAAAATCAGCAACCACCTCCTGAGGATGATTTTGATAATGACAATATTGGAACCATTGTCTTGACACCTTCTCCGGATGCTGATAGATCAATGGCAAGAAGCACGACTCAGTTGGCTCGACATCAAGAAACCAAACTTTCAAAGGATTTTTTGTACGCCAATAGCATGGTCCAATCTCTGAATCCAGCCTCAACTGCTGCTCATATATCCGGTATTGGTATAAAAGCCATCCCTGCAATTACACACTTCTCCAGTCTTCGCTCTGTGAATTTGTCAAACAATTTCATAGTTCACATCACACCTGGATTTCTCCCAAAGGGTCTTAATACACTTAATTTGTCAAGAAACAAGATCAGCACCATTGAGGGCCTCCGAGATTTAACCCGATTGCGAGTACTTGACCTGAGTTATAATCGCATCGCAAGAATTGGACAAGGTTAG 1323 0.4218 MNSRCNLNPGLESSMKTEIEEAYEGEDEHEDSPSIKRELSDFDLQVHDPTGKEINYPSLYKKQANIQLEDRDDKHLRKSVDLIQSGHVSDPGIGKSYFWASPKLKRSCSNLERRDMLRKIADHFPSSKSQSFEDLQGLSANQMENLESPRSVMTHCSADRVMLKRRSSSQVLPSGSKKLWWKLFLWSHRNIHQPWVSKSTQLHPASAVLNSQCGYSSDILEPKQGKTLKHVGSPSPASPSGEYFSKSGKDKNIDNQKWSRFHKENFDFCTQNQWVAFSTESTSFNRVDEWVKDLENQQPPPEDDFDNDNIGTIVLTPSPDADRSMARSTTQLARHQETKLSKDFLYANSMVQSLNPASTAAHISGIGIKAIPAITHFSSLRSVNLSNNFIVHITPGFLPKGLNTLNLSRNKISTIEGLRDLTRLRVLDLSYNRIARIGQG 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01619 440 Gene3D Ribonuclease Inhibitor 320 439 IPR032675 -
Car05g01619 440 SUPERFAMILY Outer arm dynein light chain 1 362 438 - -
Car05g01619 440 MobiDBLite consensus disorder prediction 226 250 - -
Car05g01619 440 MobiDBLite consensus disorder prediction 1 36 - -
Car05g01619 440 Pfam Leucine rich repeat 379 434 IPR001611 GO:0005515
Car05g01619 440 ProSiteProfiles Leucine-rich repeat profile. 423 440 IPR001611 GO:0005515
Car05g01619 440 ProSiteProfiles Leucine-rich repeat profile. 401 422 IPR001611 GO:0005515
Car05g01619 440 PANTHER NISCHARIN RELATED 73 440 - -
Car05g01619 440 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 73 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01619 Car-Chr5 60931256 60935563 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01619 - - cam:101493323 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01619 05 60931256 60935563 Car05g01619 05 60931256 60935563 ECH
Car02g01122 02 31960805 31963812 Car05g01619 05 60931256 60935563 PCT