Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01122 ATGGCAATATTTAGGTGCTTCTCTATTTTGAATGAAAAGAAGGTGAAAAACAAGGTGGGGAAAGAAAGATGTTCAAGAGAGAATTTTGATACTCTACTTGCCAAACTACATCACTCAGCATCATCAGAGAAGCATGATTTGAAACCAACCACTTTGGATCTTACTGTAAAAAATGATTCGCAGAAAAACTCGAGGCGCAACGTGAGGGTTATGATGATGAGTCTTGAGAGCCCCGTGAAGGTTGAAGTGCCAGAAGTTTataaaactggagatgagaatgagaataagaatgaaaatgaaaatTCGCTCTCAATTAAGAGGGAACTTTCAAATTTTGATCTTCAATTCCATGAAGCTGTTGGAAGCAAAGGAAGGTATGATCCAACAGCTGATGAATTGGAAGATCAAAGCCATAGGTACAGCCGAAAGAGCAATGATACAATCGACACAGGACATGTTAGTGATCCAGGTATTGGGAGGACTGATTTCTTGGCTTCTCCAAACCTCAAGCGATCGTGCTCTAACCTTGAAACTAGGAATATTGAGAGGCAGGTAACTCAATATTTGCGTCCTTCAAAGCCTCAGTCTTTTGAAGACTTTCGCGAATTATCAGGAAACCCAATGGTTAATCTCAAGCGGTCTAGGTCTGCGAGGAGTCACTGCAGTGCTGATAGAGTGATGATGACAAGGCATTCTTCAAGTCAAGTACTCCCGTCTGGTAGTAAAAAATTATGGTGGAAGTTATTCCTTTTGAGCAACAGGAATATACATAGAAAATTCTCTAAAAAACCAAAACTAGTTCCTGCTATTAGTTCCTTAAGCAATCAATTCGATTACTCTTCAAACACGGTTGAACTGAAACAAAGCAAGGCACTGAGACATGTGCAATCGTCTTCTTCAACTACGGCTCATTACCTTAACAGAATCACTGAAGATGATGATGATCAAAGAGAGAGCAGGTTTCAAAATGAAAATTCCGGATTTTGGCGTCAAAAACAATGGTTTGCTCTCTCAACAGAAGCGTCGTCTTCTTTTTCCAGGGTGCATGCATGGGTCAGAGATCTTGAAATTCAGGAACCGGTTCCTGAGGATGATTTTCTTGATGATAATGCCAGAAGCGTTGCCTTCCCACCTTCTCCTAATGCTGGTATATCAATGATAAAAAACACATCTCAGTTGACTCGTTCAAAGTCCAATCTTTCGATGGATATTTTGAAAGCCAATAGTATGGTTCAGTCTATACATCCGGCTTCATCTGTTGCTCACATGTCCGGTGTTGGTATAAAAGCCATCCCCGTAATTTCACACTTTTCCAATCTCCGCTATGTCAATTTGTCCAGCAACTTCATAGTTAGCATCTCACCAGGATGTCTACCAAAGAGTGTTCAAACACTTATTTTATCAAAAAACAAGATTACCACCCTTGACGGCCTCAAAGAATTGACCCGGTTGCGTGTGCTTGATCTAAGTTACAACTGTATTTCAAGAATTGGACAAGGTTTGTCAAGTTGTACACTTATCAAAGAGTTATATCTTTCTCGTAACAAGATAAGTGATGTGGAAGGGCTTCATAGACTGTTCAAGCTAACAGTTCTCGACATGAGCTTCAACAAGATCACAACCACAAAAGCAATAGGACAGTTAGTGGCTAACTACAACTCACTCCAAGCCCTTAATATACTTGGAAATCCTATTCAGAGAAACGTAAGCGATGAACAACTAAACAAAATTGTATCGGGTCTCCTTCCAAAGTTGGTGTACTTAAATAAAAAAACCCTCAAAAACTCAATGGACGCGGGAACTATTGAGTGA 1812 0.3929 MAIFRCFSILNEKKVKNKVGKERCSRENFDTLLAKLHHSASSEKHDLKPTTLDLTVKNDSQKNSRRNVRVMMMSLESPVKVEVPEVYKTGDENENKNENENSLSIKRELSNFDLQFHEAVGSKGRYDPTADELEDQSHRYSRKSNDTIDTGHVSDPGIGRTDFLASPNLKRSCSNLETRNIERQVTQYLRPSKPQSFEDFRELSGNPMVNLKRSRSARSHCSADRVMMTRHSSSQVLPSGSKKLWWKLFLLSNRNIHRKFSKKPKLVPAISSLSNQFDYSSNTVELKQSKALRHVQSSSSTTAHYLNRITEDDDDQRESRFQNENSGFWRQKQWFALSTEASSSFSRVHAWVRDLEIQEPVPEDDFLDDNARSVAFPPSPNAGISMIKNTSQLTRSKSNLSMDILKANSMVQSIHPASSVAHMSGVGIKAIPVISHFSNLRYVNLSSNFIVSISPGCLPKSVQTLILSKNKITTLDGLKELTRLRVLDLSYNCISRIGQGLSSCTLIKELYLSRNKISDVEGLHRLFKLTVLDMSFNKITTTKAIGQLVANYNSLQALNILGNPIQRNVSDEQLNKIVSGLLPKLVYLNKKTLKNSMDAGTIE 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01122 603 ProSiteProfiles Leucine-rich repeat profile. 506 527 IPR001611 GO:0005515
Car02g01122 603 PANTHER NISCHARIN RELATED 4 595 - -
Car02g01122 603 Gene3D Ribonuclease Inhibitor 503 598 IPR032675 -
Car02g01122 603 ProSiteProfiles Leucine-rich repeat profile. 461 482 IPR001611 GO:0005515
Car02g01122 603 Pfam Leucine Rich repeat 528 540 IPR001611 GO:0005515
Car02g01122 603 MobiDBLite consensus disorder prediction 307 321 - -
Car02g01122 603 ProSiteProfiles Leucine-rich repeat profile. 483 505 IPR001611 GO:0005515
Car02g01122 603 MobiDBLite consensus disorder prediction 303 322 - -
Car02g01122 603 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 4 595 - -
Car02g01122 603 MobiDBLite consensus disorder prediction 120 161 - -
Car02g01122 603 SMART LRR_sd22_2 504 525 - -
Car02g01122 603 SMART LRR_sd22_2 526 547 - -
Car02g01122 603 SMART LRR_sd22_2 481 503 - -
Car02g01122 603 SMART LRR_sd22_2 459 480 - -
Car02g01122 603 Pfam Leucine rich repeat 438 492 IPR001611 GO:0005515
Car02g01122 603 MobiDBLite consensus disorder prediction 124 149 - -
Car02g01122 603 Gene3D Ribonuclease Inhibitor 372 502 IPR032675 -
Car02g01122 603 SMART LRR_typ_2 437 460 IPR003591 -
Car02g01122 603 SMART LRR_typ_2 481 504 IPR003591 -
Car02g01122 603 SMART LRR_typ_2 526 548 IPR003591 -
Car02g01122 603 SUPERFAMILY Outer arm dynein light chain 1 430 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01122 Car-Chr2 31960805 31963812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01122 432 593 Receptor kinase-like Gene Family AT5G56040 31.667 3.12e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01122 - - gmx:100810094 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01122 02 31960805 31963812 Car02g01122 02 31960805 31963812 ECH
Car02g01122 02 31960805 31963812 Car05g01619 05 60931256 60935563 PCT