Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01507 ATGGAGGGTATGAAAAAGATTATGACCAAAGCCAAAtgctctttcatcttcatagccatttctgttctcttatcttccgcattgtctttagcaaatgccaaaactcacaaccacgaatttgtagttgaagcaactccagtgaagaggctgtgcaaaactcacaataccatcactgtgaatgggcaataccccggtcccactttggaaatcaacaatggagactctttggttattaaagtcactaataaagctcgttacaatgtcaccattcattgGCATGGTATTCGACAAATGAGAACAGGATGGGCAGATGGTCCAGAATTTATAACTCAATGCCCCATTCGTCCAGGAGGAAGTTACACTTATCGATTCACTGTTGAAGGACAAGAAGGGACACTTTGGTGGCATGCTCATAGCTCATGGCTAAGAGCCACCGTTTATGGAGCTTTAATCATTCGTCCTAGGGAAGGAGAGACTTACCCTTTTCCTAAGCCAAACCGTGAGACACCCATTCTTTTAGGGGAATGGTGGGACAGAAACCCCATAGATGTTGTGAGGCAGGCCCAAAGAACAGGGGCAGCTCCAAATGTGTCCGATGCATACACTATCAATGGTCAACCCGGTGACCTATATAAGTGCTCTACCAAAGGTACAACAATTGTTCCGATACGTTACGGCGAAACAAACCTCATTCGAGTAATCAACGCAGCACTGAACCAACCACTTTTCTTCAAAATCGCTAACCACAAACTAACTGTAGTTGGTGCTGATGCCTCTTACCTTAAACCATTCACAACCAATGTCCTTATGTTAGGACCAGGCCAAACCACTGATGTCTTAATAACCGCAAACCAACCGATTTCTCGTTACTACATAGCAGCATCTGCTTATCAATCAGCTCAAAACGCAGCGTTTGATAACACCACAACCACTGCTATTCTCCAATATCACAATTCAATCAAAACTAAACCAATCATGCCTTCACTCCCTTCTTTCAATGACACCAACACAGTTACTAAATTCAGCAAAAGCTTTAAAAGCCTCAAAAAAGTTGAAGTCCCCAATGAAATTGACGAAAATCTATTTTTTACAATTGGTTTAGGACTCAACAAGTGCCCAAAAAATTTCAGAAAAAGAAGATGTCAGGGTCTTAATGGTTCACGCTTCACTGCAAGCATGAACAATGTCTCTTTTACTCTTCCAAATAATTTATCCATTTTGCAGGCTCATTACTTTGGAATCCCAGGTGTTTTCACCACTGATTTTCCTGCTAAGCCTCCGGTGAAATTCGATTACACCGGAAACGTGAGTCGTTCTTTGTGGCAACCTGTTCCGGGGACTAAAGCTTATAAGTTGAAGTTTGGATCAAGAGTGCAGATTGTGTTGCAGGATACAAGTATTGTCACTGCAGAGAATCATCCAATTCACCTTCATGGCTATGATTTCTACATTGTTGCTCAAGGATTTGGAAATTTTGATTCTAAGAAAGATACTGCAAAATTCAACCTTGTTGATCCACCTATGAGGAATACAGTTGCTGTACCTGTTAATGGTTGGTCAGTTATTCGGTTTGTTGCTGATAACCCAGGTGCTTGGATTATGCATTGTCACTTGGATGTTCACATCAATTGGGGTTTGGCCACTGTGCTATTGGTAGAGGATGGAGTTGGGAAATATCAATCCATAGAGCCCCCTCCATTAGACTTGCCACGATGTTAG 1719 0.3618 MEGMKKIMTKAKCSFIFIAISVLLSSALSLANAKTHNHEFVVEATPVKRLCKTHNTITVNGQYPGPTLEINNGDSLVIKVTNKARYNVTIHWHGIRQMRTGWADGPEFITQCPIRPGGSYTYRFTVEGQEGTLWWHAHSSWLRATVYGALIIRPREGETYPFPKPNRETPILLGEWWDRNPIDVVRQAQRTGAAPNVSDAYTINGQPGDLYKCSTKGTTIVPIRYGETNLIRVINAALNQPLFFKIANHKLTVVGADASYLKPFTTNVLMLGPGQTTDVLITANQPISRYYIAASAYQSAQNAAFDNTTTTAILQYHNSIKTKPIMPSLPSFNDTNTVTKFSKSFKSLKKVEVPNEIDENLFFTIGLGLNKCPKNFRKRRCQGLNGSRFTASMNNVSFTLPNNLSILQAHYFGIPGVFTTDFPAKPPVKFDYTGNVSRSLWQPVPGTKAYKLKFGSRVQIVLQDTSIVTAENHPIHLHGYDFYIVAQGFGNFDSKKDTAKFNLVDPPMRNTVAVPVNGWSVIRFVADNPGAWIMHCHLDVHINWGLATVLLVEDGVGKYQSIEPPPLDLPRC 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01507 572 CDD CuRO_3_LCC_plant 417 555 IPR034289 GO:0005507
Car05g01507 572 Gene3D - 164 351 IPR008972 -
Car05g01507 572 ProSitePatterns Multicopper oxidases signature 1. 530 550 IPR033138 -
Car05g01507 572 TIGRFAM laccase: laccase 33 572 IPR017761 GO:0046274|GO:0048046|GO:0052716
Car05g01507 572 Gene3D - 12 154 IPR008972 -
Car05g01507 572 PANTHER MULTI-COPPER OXIDASE 11 572 IPR045087 -
Car05g01507 572 Pfam Multicopper oxidase 422 554 IPR011706 GO:0005507|GO:0016491
Car05g01507 572 SUPERFAMILY Cupredoxins 162 345 IPR008972 -
Car05g01507 572 CDD CuRO_1_LCC_plant 38 154 IPR034288 GO:0005507
Car05g01507 572 PANTHER LACCASE 11 572 - -
Car05g01507 572 Pfam Multicopper oxidase 42 156 IPR011707 GO:0005507
Car05g01507 572 CDD CuRO_2_LCC_plant 170 316 IPR034285 -
Car05g01507 572 SUPERFAMILY Cupredoxins 353 572 IPR008972 -
Car05g01507 572 Gene3D - 371 572 IPR008972 -
Car05g01507 572 Pfam Multicopper oxidase 168 318 IPR001117 -
Car05g01507 572 SUPERFAMILY Cupredoxins 30 181 IPR008972 -
Car05g01507 572 ProSitePatterns Multicopper oxidases signature 2. 535 546 IPR002355 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01507 Car-Chr5 59423754 59428323 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01507 K05909 - gmx:100808948 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01507 05 59423754 59428323 Car05g01507 05 59423754 59428323 ECH
Car05g01507 05 59423754 59428323 Car02g01738 02 46492374 46496085 PCT