Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01738 ATGGAAACTCTCAACATCATAATCttagccatttttgttctctttgcttctttagctaatgccaaaattcatgagcatgagtttgttgttcaagcaactccagtgaagaggctgtgcaacacacatagtagcatcactgtaaatggacaatttccaggtccaactttggaagtcaataatggagatactttggttgtcaaagtcattaataaagctcattacaatgtcaccattcattgGCATGGAATCAGACAAATCAGAACAGGATGGGCTGATGGACCAGAATTTATAACTCAATGTCCTATTCGTCCTGGTGAAAGTTACACCTATAGATTTACCATTCAAGGACAAGAAGGCACACTTTGGTGGCATGCTCATAGTTCATGGTTGAGAGCCACTGTTTATGGAGCTCTAATCATTCGTCCTAAGGAAGGAGAGACCTATCCTTTCACTAAGCCAAAGCGTGAAACACCTCTTCTTTTAGGGGAATGGTGGGATGCAAACCCTATTGATGTTATTAAGCAAGCCACACAAACAGGAGCAGCTCCAAATATATCTGATGCATACACTATTAATGGTCAACCTGGTGATCTTTACAAGTGCTCTAGCCAAGAAACAACGATTGTTCCAATAGATTCAGGAGAAACAAACCTCTTGAGAGTAATCAATGCAGCATTAAACCAACCACTTTTCTTCACAGTTGCAAATCACAAACTCATAGTAGTAGGTGCTGATGCTTCCTATGTTAAACCATTCACAACAAACACTCTCATGTTAGGACCTGGTCAAACCACTGATGTTCTCATAGTAGCTGACCAACCACCATCAAGATACTACATAGCTGCACGTGCTTACCAATCAGCACAAAATGCACCTTTTGACAACACAACAACAACCTCAATTCTTGAATACAAATCAGCACCTTGTCCTAAAAAGGGGGGTGCATCTAGTAATAAACCTATTATGCCTTCATTACCTTCTTACAATGACACAAACACAGTTACTTCTTTTAGTAAAAGTTTTAGAAGCCTTAGAAAAGTTGAAGTCCCTCTGGAAATTGATGAAGATCTTTTCTTTACTATTGGATTAGGACTCAACAATTGTCCAAAAAATTTTGATGCAAAAAAACAATGTCAAGGGCCTAATGGAACACGTTTCACTTCTAGTATGAACAATGTGTCTTTTGTACTTCCTAGCAATTTTTCAATCTTGCAAGCTCATAAACTTGGAGTTCAAGGCGTTTTTACCGATGATTTTCCGGCAAAACCTCCGGTGAAATTCGATTATACTGGTAATGTGAGTCGGTCGCTCTGGCAACCGATTCAGGGGACTAAAGTTACTAAGTTGAGATTTGGATCAAGGGTGCAGATTGTTTTGCAGGATACTAGTATTGTTACTCCTGAGAATCACCCTATTCATCTTCATGGGTATGATTTTTATATTGTTGCTGAGGGTTTTGGAAATTTTGATTCAAAGAAAGATGCTTCAAAATTTAATCTTGTTGATCCACCTATGAGGAACACTGTTGCTGTGCCTGCTAATGGATGGGCTGTAATTAGATTTGTTGCTGATAATCCAGGTGTATGGATTCTGCATTGTCACTTGGATGTTCACATAGCATGGGGTTTGGCCACTGTTCTCTTGGTAGAAGATGGAGAAGGATTATTGGAATCCATAGAAGCTCCTCCAGAGGACCTTCCTTTGTGTTAG 1710 0.3468 METLNIIILAIFVLFASLANAKIHEHEFVVQATPVKRLCNTHSSITVNGQFPGPTLEVNNGDTLVVKVINKAHYNVTIHWHGIRQIRTGWADGPEFITQCPIRPGESYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIRPKEGETYPFTKPKRETPLLLGEWWDANPIDVIKQATQTGAAPNISDAYTINGQPGDLYKCSSQETTIVPIDSGETNLLRVINAALNQPLFFTVANHKLIVVGADASYVKPFTTNTLMLGPGQTTDVLIVADQPPSRYYIAARAYQSAQNAPFDNTTTTSILEYKSAPCPKKGGASSNKPIMPSLPSYNDTNTVTSFSKSFRSLRKVEVPLEIDEDLFFTIGLGLNNCPKNFDAKKQCQGPNGTRFTSSMNNVSFVLPSNFSILQAHKLGVQGVFTDDFPAKPPVKFDYTGNVSRSLWQPIQGTKVTKLRFGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDSKKDASKFNLVDPPMRNTVAVPANGWAVIRFVADNPGVWILHCHLDVHIAWGLATVLLVEDGEGLLESIEAPPEDLPLC 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01738 569 TIGRFAM laccase: laccase 21 569 IPR017761 GO:0046274|GO:0048046|GO:0052716
Car02g01738 569 ProSitePatterns Multicopper oxidases signature 2. 532 543 IPR002355 GO:0005507
Car02g01738 569 Pfam Multicopper oxidase 156 306 IPR001117 -
Car02g01738 569 Pfam Multicopper oxidase 30 144 IPR011707 GO:0005507
Car02g01738 569 Gene3D - 155 347 IPR008972 -
Car02g01738 569 SUPERFAMILY Cupredoxins 19 169 IPR008972 -
Car02g01738 569 PANTHER LACCASE 8 569 - -
Car02g01738 569 Gene3D - 25 154 IPR008972 -
Car02g01738 569 ProSitePatterns Multicopper oxidases signature 1. 527 547 IPR033138 -
Car02g01738 569 PANTHER MULTI-COPPER OXIDASE 8 569 IPR045087 -
Car02g01738 569 CDD CuRO_1_LCC_plant 26 142 IPR034288 GO:0005507
Car02g01738 569 Pfam Multicopper oxidase 419 552 IPR011706 GO:0005507|GO:0016491
Car02g01738 569 CDD CuRO_2_LCC_plant 158 304 IPR034285 -
Car02g01738 569 CDD CuRO_3_LCC_plant 414 552 IPR034289 GO:0005507
Car02g01738 569 SUPERFAMILY Cupredoxins 350 569 IPR008972 -
Car02g01738 569 SUPERFAMILY Cupredoxins 150 344 IPR008972 -
Car02g01738 569 Gene3D - 371 569 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01738 Car-Chr2 46492374 46496085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01738 K05909 - gmx:100796956 1041.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01507 05 59423754 59428323 Car02g01738 02 46492374 46496085 PCT