Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01503 ATGCCTTCTTCTCTTCAGCTTGAGAGATTCAATCCTACAATCGCCAACGGTGTAAACTGTCCTAGACAGTCTCAAACACAACCACCGAACGGAGGAAGCATCGTTCTAGAAAGCTTAGCTCTTCACCACGCGCATATGGTGGGACCCAACCAGTGTTGCTCCGTGGTGACACAAGTGATCGAAGCTCCCGTCTCCGCCGTGTGGGCGGTGGTTCGACGATTCGATAATCCACAGGGTTATAAGAACTTCGTGAAGAGTTGCCACGTCATCACTGGGGACGGTAATAACGTGGGCACAGTACGCGAGGTTCGTGTGGTTTCCGGGCTTCCAGCCGAGTCGAGTAGAGAGCGGCTGGAGATCTTAGACGAGGAGCGCCACGTCATCAGCTTCAGCGTGGTTGGTGGGGACCACCGTTTGAGAAACTATCGTTCCGTTACAACGCTTCATTCTCTAAACGGAAACGGGACACTTGTGATTGAATCATTCGTCGTTGATGTACCGCAAGGTAACACGAAGGAAGAGACATGCGTTTTTGTTGACACAATCGTACGTTGTAATTTGCAGTCGTTGGGTCAGATCGCTGAGAACACGATCAGAAATTGA 603 0.5075 MPSSLQLERFNPTIANGVNCPRQSQTQPPNGGSIVLESLALHHAHMVGPNQCCSVVTQVIEAPVSAVWAVVRRFDNPQGYKNFVKSCHVITGDGNNVGTVREVRVVSGLPAESSRERLEILDEERHVISFSVVGGDHRLRNYRSVTTLHSLNGNGTLVIESFVVDVPQGNTKEETCVFVDTIVRCNLQSLGQIAENTIRN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01503 200 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 23 200 - -
Car05g01503 200 Pfam Polyketide cyclase / dehydrase and lipid transport 52 192 IPR019587 -
Car05g01503 200 PANTHER - 23 200 - -
Car05g01503 200 CDD PYR_PYL_RCAR_like 52 195 - -
Car05g01503 200 SUPERFAMILY Bet v1-like 51 193 - -
Car05g01503 200 Gene3D - 23 200 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01503 Car-Chr5 59353564 59354836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01503 K14496 - gmx:100808416 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01735 02 46450332 46451716 Car05g01503 05 59353564 59354836 ECH
Car03g01325 03 58168225 58169338 Car05g01503 05 59353564 59354836 ECH
Car06g02464 06 27601257 27602334 Car05g01503 05 59353564 59354836 ECH
Car05g01503 05 59353564 59354836 Car05g01503 05 59353564 59354836 ECH
Car05g01503 05 59353564 59354836 Car02g01735 02 46450332 46451716 PCT