Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01325 ATGTTACCGAACCCAACAACCACCGTTCCCGACGCCGTCGCTCGCTACCACACACACGCCGTCTCCCCTAACCAGTGTTGCTCCGCCGTCATCCAAGAAATCGCCGCTCCCGTCTCCACCGTCTGGTCCGTCGTCCGCCGTTTCGACAATCCCCAAGCCTACAAACACTTTGTTAAAAGCTGCCACGTCATCCTCGGCGACGGTGACGTCGGTACACTCCGTGAAGTCCGTGTCATCTCCGGCCTTCCCGCCGCCGTCAGCACCGAACGCCTTGAAGTTCTCGACGATGAACGCCACGTCATCAGTTTCAGTATGATCGGCGGCGACCACCGCCTCGCTAACTACCGTTCTGTAACTACTCTTCATTCTAGTCCGATCTCCGATTCCGACGGTAATCACCGCTCCGGCACGGTTGTTGTTGAGTCATACGTCGTTGATGTGCCGCCGGGAAACACTACTGATGATACTCGCGTCTTTGTTGATACCATCGTTCGTTGCAACCTTCAATCGCTCGCGAAATTCGCCGAGAATTTGAATCAAAGATAA 546 0.5531 MLPNPTTTVPDAVARYHTHAVSPNQCCSAVIQEIAAPVSTVWSVVRRFDNPQAYKHFVKSCHVILGDGDVGTLREVRVISGLPAAVSTERLEVLDDERHVISFSMIGGDHRLANYRSVTTLHSSPISDSDGNHRSGTVVVESYVVDVPPGNTTDDTRVFVDTIVRCNLQSLAKFAENLNQR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01325 181 Pfam Polyketide cyclase / dehydrase and lipid transport 32 173 IPR019587 -
Car03g01325 181 Gene3D - 2 181 IPR023393 -
Car03g01325 181 PANTHER ABSCISIC ACID RECEPTOR 7 180 - -
Car03g01325 181 SUPERFAMILY Bet v1-like 27 175 - -
Car03g01325 181 PANTHER - 7 180 - -
Car03g01325 181 CDD PYR_PYL_RCAR_like 26 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01325 Car-Chr3 58168225 58169338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01325 K14496 - gmx:100805378 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01325 03 58168225 58169338 Car02g01735 02 46450332 46451716 ECH
Car03g01325 03 58168225 58169338 Car05g01503 05 59353564 59354836 ECH
Car03g01325 03 58168225 58169338 Car03g01325 03 58168225 58169338 ECH