Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01476 ATGTTGAAAACCCAAACAGATTGGCCAGAGCCAATAATCAGGGTTCAATCTTTGTCTGAAGGATGCAAAGATTCAATCCCTGAAAGATACATCAAGCCACCAATTGATAGGCCATTTGTACAAAACTCTTGTTATGATGGAATCAACAATATTCCAATTATAGACCTTGGAGGTTTGAATGGTGATGACCTTGATGTTAGAGGTTCAATCCTTAAGAAAATCTCTGAGGCTTGTCGTGAGTGGGGTTTTTTCCAAATTGTTAACCATGGTGTAAGCCATGATTTGATGGACAAAGCTAGGGAAACTTGGCGTGAATTCTTTCACTTGCCTATGGAAGTGAAGCAACAATATGCAAACTCACCAAAGACTTATGAAGGGTATGGTAGTAGACTTGGTATTGAAAAAGGTGCTATTCTTGATTGGAGTGATTACTACTTTTTGCACTATTCTCCCTTCTCTCTTAAGGACTACAACAAATGGCCTTCTTCTCCTCCATCTTGCAGAGAAGTGTTTGATGAGTATGGAAGAGAGCTAGTGAAGCTATGTGGGAGATTAATGAAGGTTCTATCAATAAACCTTGGATTAGAAGAAGAAAAACTTAAAAATGCATTTGGGGATGAAATAGGGGCATGCATGAGAATAAATTTTTATCCAAAGTGTCCAAGGCCAGAATTGACATTAGGACTATCATCACACTCTGATCCAGGAGGGATGACTATGTTGCTTCCAGATGATCAAGTAGCTGGCCTTCAAGTACGAAAATTTCATCATTGGATTACTGTTAATCCTGCTCCATATGCCTTCATTGTCAACATTGGTGACCAAATACAGGTTCTAAGCAATGCAACATACAAGAGTGTGGAGCACCGAGTAATCGTGAATTCAGATAAAGAGAGAGTTTCCCTTGCATTCTTCTACAACCCCAAAAGTGATATACCAATTGAGCCACTAAAAGACCTTTTAACCCCCGAAAGGCCCGCACTATACCCACCAATGACCTTCGATGAATACAGGCTCTTCATTAGAATGAGAGGCCCTTGTGGCAAATCTCAAGTCGAATCTATGAAGTCTCCCATATAA 1080 0.3991 MLKTQTDWPEPIIRVQSLSEGCKDSIPERYIKPPIDRPFVQNSCYDGINNIPIIDLGGLNGDDLDVRGSILKKISEACREWGFFQIVNHGVSHDLMDKARETWREFFHLPMEVKQQYANSPKTYEGYGSRLGIEKGAILDWSDYYFLHYSPFSLKDYNKWPSSPPSCREVFDEYGRELVKLCGRLMKVLSINLGLEEEKLKNAFGDEIGACMRINFYPKCPRPELTLGLSSHSDPGGMTMLLPDDQVAGLQVRKFHHWITVNPAPYAFIVNIGDQIQVLSNATYKSVEHRVIVNSDKERVSLAFFYNPKSDIPIEPLKDLLTPERPALYPPMTFDEYRLFIRMRGPCGKSQVESMKSPI 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01476 359 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 9 356 - -
Car05g01476 359 PRINTS Isopenicillin N synthase signature 74 91 - -
Car05g01476 359 PRINTS Isopenicillin N synthase signature 296 314 - -
Car05g01476 359 SUPERFAMILY Clavaminate synthase-like 12 341 - -
Car05g01476 359 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 207 308 IPR005123 -
Car05g01476 359 Pfam 2OG-Fe(II) oxygenase superfamily 210 308 IPR044861 -
Car05g01476 359 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 356 - -
Car05g01476 359 Gene3D - 11 342 IPR027443 -
Car05g01476 359 Pfam non-haem dioxygenase in morphine synthesis N-terminal 51 162 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01476 Car-Chr5 59034145 59037937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01476 51 356 Glycosyltransferase AT5G59530 33.121 4.64e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01476 - - gmx:100814471 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01709 02 46149268 46152817 Car05g01476 05 59034145 59037937 ECH
Car05g01476 05 59034145 59037937 Car05g01476 05 59034145 59037937 ECH