Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01709 ATGAGCACTCCACAAGATTGGCCCGAACCAATAATTCGAGTTCAAACTTTATCTGAAAATTGCAAAGATTCAATCCCTAAAAGTTACATCAAACCTCTTAGTGACCGTCCATCCATAAACTCTAATATTGAAACAACAAACATTAATATACCAATTATTGACCTTAGAGGTATATATAGTAATGACCCAAATGAAAAAGTCTCAACCTTTAACCAAATCTCTAAGGCTTGCAAAGATTGGGGATTTTTTCAAATTGTTAATCATGGTGTTAGCCATGATTTGATGGACTTGGCTAAGGAAACTTGGCGCCAATTCTTTCACTTGCCTATGGAAGTTAAACAACAATATGCAAACTCACCAAAAACTTATGAAGGGTATGGTAGTAGACTTGGTGTTAAGAAAGGTGCTATTCTTGATTTGAGTGATTACTATTATCTTCATTATCTTCCTTTGTCTTTGAAGGACTACAACAAATGGCCTTCCCTTCCTCCCTCTTGCAGACACATTATTATGTGCCTTAGTCCTTTTGTGTACAAGATAATTAGGATAAAAAAAATAAATGTAGGGAAGTGTTTGATGAATATGGGAAAGAAAGAAGAATGTTTTGAAAGTGCTTTTGGAGGTGAAGACATAGGTGCTTGCATAAGGGTGAATTATTATCCAAAATGTCCACAACCAGATTTGACTCTTGGTTTATCATCACACTCAGATCCAGGTGGAATCACTATTTTGCTTTCAGATGATCATGTACATGGTCTTCAAGTTCGCAAAGGTGACAATTGGATTACTGTCAAACCTCTTTCCAATGCTTTTATTGTCAATATTGGTGATCAAATTCAGGTACTAAGCAATGCAACCTACAAGAGTGTGGAGCATAGAGTACTAGTAAATTCACATAAAGAGAGAGTTTCCTTAGCCTTCTTCTACAACCCTAAAAGTGACATATTAATAGAGCCAGCAAAAGAATTAGTAAAGCCAGATAGACCTTCACTCTACCCTCCTATGACCTTTGATGAATACAGGCTCTTCATTAGATTGAAGGGAACATGTGGAAAATCTCAAGTTGAATCTTTAAAATCTCCAAGATGA 1089 0.36 MSTPQDWPEPIIRVQTLSENCKDSIPKSYIKPLSDRPSINSNIETTNINIPIIDLRGIYSNDPNEKVSTFNQISKACKDWGFFQIVNHGVSHDLMDLAKETWRQFFHLPMEVKQQYANSPKTYEGYGSRLGVKKGAILDLSDYYYLHYLPLSLKDYNKWPSLPPSCRHIIMCLSPFVYKIIRIKKINVGKCLMNMGKKEECFESAFGGEDIGACIRVNYYPKCPQPDLTLGLSSHSDPGGITILLSDDHVHGLQVRKGDNWITVKPLSNAFIVNIGDQIQVLSNATYKSVEHRVLVNSHKERVSLAFFYNPKSDILIEPAKELVKPDRPSLYPPMTFDEYRLFIRLKGTCGKSQVESLKSPR 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01709 362 Pfam 2OG-Fe(II) oxygenase superfamily 213 311 IPR044861 -
Car02g01709 362 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 210 311 IPR005123 -
Car02g01709 362 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 359 - -
Car02g01709 362 PRINTS Isopenicillin N synthase signature 73 90 - -
Car02g01709 362 PRINTS Isopenicillin N synthase signature 271 297 - -
Car02g01709 362 Pfam non-haem dioxygenase in morphine synthesis N-terminal 50 161 IPR026992 -
Car02g01709 362 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 8 359 - -
Car02g01709 362 SUPERFAMILY Clavaminate synthase-like 11 344 - -
Car02g01709 362 Gene3D - 10 344 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01709 Car-Chr2 46149268 46152817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01709 25 359 Glycosyltransferase AT5G59530 30.398 4.00e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01709 - - gmx:100784518 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01709 02 46149268 46152817 Car05g01476 05 59034145 59037937 ECH
Car02g01709 02 46149268 46152817 Car02g01709 02 46149268 46152817 ECH