Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01470 ATGAAAAAGAAGATCTTGAAATTGTTAAAAATTTTGACCAAAAATGTTAATTTGAATAAGGGAGAACCACCTTTGGATCTTAAGGAAGTTTTTTTGATGTTTACAAATGGAGAGAACCACATGTCAAAGGATCAACTACTTCGATTCATGGTGGAACATCAGGGAGAACAAAACTGCACCTTATTGGATTTGGAGCCAATCATTCAAAAGGTTTTACAAATGGGAAATTCTAGCACTGAAAGTAGCAACATTGTAGGACTAAGTTTGGATGAGTTCATTGATTTTCTGCTTCTTGATGATTTCAATGGTCCCATAAAAGATGAGGTACATCATGATATGAAAGCTCCCTTGTCACATTATTTCATGTATACAGGGCACAATTCCTATCTTACTGGAAATCAATTTACCAGTGTGAGCAGTGATGAGCCAATTATAGAGGCTTTACTACAAGGTGTACGAGTTATTGAACTAGATTTATGGCCATCTTCAACTAAATATGGTGGTATTAAAGTAGTTCATGGAAGGACTCTTACCACTCCAGTAGCACTAACCAAATGCTTGGAATCCATAAAGAAATATGCTTTTGTCAAATCTGATTTTCCAGTTATTTTAACTTTGGAAGACCATCTAACACCAAAACTTCAGGCTAAATTTGCACAAATGGCAATTCAAATATTTGGAGAAATGCTTCATTATCCCGAGACAGATTATGTAACAGAATTCCCTTCTCCAGCATCACTAAAAAATATGATAGTTATATCAACTAAACCACCAAAGGAATATCCTCAATCTGATAGTGTCATCAACAATCATGCTTCAAATGGAAGTGAATCATCAGAAGAATATGAATCATGGGGACAAGAATTGCAAGATTCTATTATGGCTAAATTGAAAAATGAGAACAATAATACAAGTAATGAAGAGATGGAAGATATAAGTATAAGTGATTACAAATCAAACCAGCAACAAGGTGCACGTCAATACAAAGATTTGATTACAATTCATTGTGGAAAATCAGAAGGTTCTATGAAGGATAGACTTAAAGTTGATCATGGTGGTAAAGTTAGAAGGATAAGTTTGAGCGAGAAGACGGTAAAAAATGCTTGTGAATCTCATGGAGCTGATCTAATAAGGTTCACACAGAAAAATATCCTCAGAGTTTATCCTAAAGGAGAACGTGTCATATCCTCAAATTTTAGGCCACATTTAGGGTGGATGTATGGAGCTCAGATGGTTGCATTCAATATGCAGGGGTATGGCAAATCACTGAGGTTGATGCAAGGGATGTTCAGAGCAAATGGAGGGTGTGGTTATGTGAAAAAACCTGAATTTCTAATTCAAGAAGGTGCAAATAATGAGGTTTTTGATCCTAGAAGAACACTGCCAATGAAACAGATATTAAAAGTAAAAGTATACAAAGGAGATGGTTGGAAAACAGATTTCAGTCCAACACATTTCGATCGATTCTCTCCACCGGATTTTTACACAAAGGTTTGTATTGTTGGAGTTGCAGCTGATAGTGTGAAGAAGAAAACAAGTGTAAAAATGAACAATTGGCATCCTATTTGGGATGAAGAGTTCGAATTCAGTTTGACAGTTCCGGAGCTCGCGTTGCTTCGGATAGAAGTAAAGGATAAAAATCAGACACAAGATAATTTTGCTGGACAAACTTGTTTGCTCGTATCAGAACTAAGACATGGATTTCGGTCTGTTCCTTTGTATGACACAAAGGGAAAGAAATTTACCTCTGTCAAGCTTTTACTTCGCTTCCACTTTAAAACTCTAAATATATAG 1794 0.3573 MKKKILKLLKILTKNVNLNKGEPPLDLKEVFLMFTNGENHMSKDQLLRFMVEHQGEQNCTLLDLEPIIQKVLQMGNSSTESSNIVGLSLDEFIDFLLLDDFNGPIKDEVHHDMKAPLSHYFMYTGHNSYLTGNQFTSVSSDEPIIEALLQGVRVIELDLWPSSTKYGGIKVVHGRTLTTPVALTKCLESIKKYAFVKSDFPVILTLEDHLTPKLQAKFAQMAIQIFGEMLHYPETDYVTEFPSPASLKNMIVISTKPPKEYPQSDSVINNHASNGSESSEEYESWGQELQDSIMAKLKNENNNTSNEEMEDISISDYKSNQQQGARQYKDLITIHCGKSEGSMKDRLKVDHGGKVRRISLSEKTVKNACESHGADLIRFTQKNILRVYPKGERVISSNFRPHLGWMYGAQMVAFNMQGYGKSLRLMQGMFRANGGCGYVKKPEFLIQEGANNEVFDPRRTLPMKQILKVKVYKGDGWKTDFSPTHFDRFSPPDFYTKVCIVGVAADSVKKKTSVKMNNWHPIWDEEFEFSLTVPELALLRIEVKDKNQTQDNFAGQTCLLVSELRHGFRSVPLYDTKGKKFTSVKLLLRFHFKTLNI 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01470 597 ProSiteProfiles C2 domain profile. 447 575 IPR000008 -
Car05g01470 597 Pfam Phosphatidylinositol-specific phospholipase C, X domain 113 256 IPR000909 -
Car05g01470 597 Gene3D C2 domain 462 596 IPR035892 -
Car05g01470 597 SMART plcx_3 111 256 IPR000909 -
Car05g01470 597 CDD C2_PLC_like 464 593 - -
Car05g01470 597 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 597 - -
Car05g01470 597 SMART C2_3c 466 573 IPR000008 -
Car05g01470 597 SUPERFAMILY EF-hand 23 113 IPR011992 -
Car05g01470 597 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 358 444 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Car05g01470 597 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 597 IPR001192 GO:0035556
Car05g01470 597 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 466 592 IPR035892 -
Car05g01470 597 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 359 445 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Car05g01470 597 Pfam C2 domain 466 566 IPR000008 -
Car05g01470 597 Gene3D Phosphatidylinositol (PI) phosphodiesterase 108 459 IPR017946 GO:0006629|GO:0008081
Car05g01470 597 PRINTS Phospholipase C signature 116 134 IPR001192 GO:0035556
Car05g01470 597 PRINTS Phospholipase C signature 142 162 IPR001192 GO:0035556
Car05g01470 597 PRINTS Phospholipase C signature 240 257 IPR001192 GO:0035556
Car05g01470 597 PRINTS Phospholipase C signature 384 405 IPR001192 GO:0035556
Car05g01470 597 PRINTS Phospholipase C signature 405 423 IPR001192 GO:0035556
Car05g01470 597 PRINTS Phospholipase C signature 559 569 IPR001192 GO:0035556
Car05g01470 597 SMART plcy_3 328 446 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Car05g01470 597 SUPERFAMILY PLC-like phosphodiesterases 111 447 IPR017946 GO:0006629|GO:0008081
Car05g01470 597 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 111 256 - -
Car05g01470 597 MobiDBLite consensus disorder prediction 259 285 - -
Car05g01470 597 Gene3D - 23 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01470 Car-Chr5 58936562 58941797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01470 7 593 Acyl Lipid Metabolism Gene Families AT2G40116 54.036 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01470 K05857 - gmx:100803435 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01700 02 46016394 46020352 Car05g01470 05 58936562 58941797 ECH
Car05g01470 05 58936562 58941797 Car05g01470 05 58936562 58941797 ECH
Car05g01470 05 58936562 58941797 Car02g01700 02 46016394 46020352 PCT