Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01700 ATGAATGCTCCATTATCACATTATTTCATATATACAGGCCACAATTCCTATCTAACTGGGAATCAGCTGAGCAGCGATTGCAGTGATGTGCCAATCATAAAGGCTTTGCAAAGAGGTGTGCGAGTAATTGAATTAGATTTATGGCCAAATTCAACTAAAGATGACATCGTTGTAGTTCATGGAAGGACACTTACCACCCCTGTCTCACTCGTTCAATGTTTGAAGTCCATAAAAGAGCATGCTTTTGTTAAATCTCGTTACCCAGTCATTATAACTTTAGAAGATCATCTCACACCAGATCTTCAAGCTAAAGTTGCGGAGATGACAACTCAAATCTTTGGAGACATGCTCTATTTTCCTCAGACAGATCCTTTGACAGAATTCCCCACACCAGAGTTACTAAAAGACCGTGTTCTTATATCAACCAAACCACCAAAAGAATATCTCGATTCCAAACAATTTAAGGATGCTAGTGACAGTGAAAGGGAATTGGGTGAAGAAGGATCATTGTCCCCAGCCCTTAGTGTTGAAGTTGAAGCTGATGACAGATGTAATGGAAGTGATCACGATGAGGAAGGTTTGAATCCCCGTGATAAAAAGCCAGACCAGCAGAATGCACCTCAGTACAAACGTTTGATTACAATCCATGCTGGTAAACCCAAGGGTAACATAAGGGACCACCTAAAAATTGCTGGGGATGTTAAGCGCTTGAGCTTGAGCGAGCAGGAACTTGAAAAGGCTTCCGCCTCTTATGGAGCTGATATTATTAGGTTTACACAGAAGAACATTATTAGGGTGTATCCAAAGGGAACACGTGTCACCTCTTCAAATTACAGGCCACATATAGGGTGGATGTATGGAGCTCAGATGGTCGCATTTAACATGCAGGGGCATGGAAAATCACTCTGGTATATGCAAGGGATGTTTAGAGCAAATGGTGGGTGTGGTTATGTGAAAAAGCCTGCGTTTCTTATGGAAAAAGGTCCGCACAATGAGTTTTTTGATCCTAAAAGAACACTGCCAGTAAAGACGACATTGAAGGTGAGATATTACTTGACAAGGAAATCGATTAGTTGCTTTGGTGAGATATTTTGA 1095 0.4119 MNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSTKDDIVVVHGRTLTTPVSLVQCLKSIKEHAFVKSRYPVIITLEDHLTPDLQAKVAEMTTQIFGDMLYFPQTDPLTEFPTPELLKDRVLISTKPPKEYLDSKQFKDASDSERELGEEGSLSPALSVEVEADDRCNGSDHDEEGLNPRDKKPDQQNAPQYKRLITIHAGKPKGNIRDHLKIAGDVKRLSLSEQELEKASASYGADIIRFTQKNIIRVYPKGTRVTSSNYRPHIGWMYGAQMVAFNMQGHGKSLWYMQGMFRANGGCGYVKKPAFLMEKGPHNEFFDPKRTLPVKTTLKVRYYLTRKSISCFGEIF 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01700 364 PRINTS Phospholipase C signature 127 144 IPR001192 GO:0035556
Car02g01700 364 PRINTS Phospholipase C signature 284 302 IPR001192 GO:0035556
Car02g01700 364 PRINTS Phospholipase C signature 263 284 IPR001192 GO:0035556
Car02g01700 364 PRINTS Phospholipase C signature 4 22 IPR001192 GO:0035556
Car02g01700 364 PRINTS Phospholipase C signature 30 50 IPR001192 GO:0035556
Car02g01700 364 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 238 324 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Car02g01700 364 SMART plcx_3 1 143 IPR000909 -
Car02g01700 364 SMART plcy_3 209 325 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Car02g01700 364 SUPERFAMILY PLC-like phosphodiesterases 1 326 IPR017946 GO:0006629|GO:0008081
Car02g01700 364 MobiDBLite consensus disorder prediction 150 166 - -
Car02g01700 364 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 1 353 - -
Car02g01700 364 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 237 323 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Car02g01700 364 Pfam Phosphatidylinositol-specific phospholipase C, X domain 1 143 IPR000909 -
Car02g01700 364 Gene3D Phosphatidylinositol (PI) phosphodiesterase 1 337 IPR017946 GO:0006629|GO:0008081
Car02g01700 364 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 1 143 - -
Car02g01700 364 MobiDBLite consensus disorder prediction 181 205 - -
Car02g01700 364 MobiDBLite consensus disorder prediction 150 206 - -
Car02g01700 364 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 353 IPR001192 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01700 Car-Chr2 46016394 46020352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01700 1 352 Acyl Lipid Metabolism Gene Families AT2G40116 62.983 9.05e-164 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01700 K05857 - gmx:547863 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01700 02 46016394 46020352 Car05g01470 05 58936562 58941797 ECH
Car02g01700 02 46016394 46020352 Car02g01700 02 46016394 46020352 ECH
Car05g01470 05 58936562 58941797 Car02g01700 02 46016394 46020352 PCT