Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01201 ATGAGTGGAGAATTTTCTTCAGGTGCATTGGACAGCACCCCATTTTTACATAACCAATATGCAGAATCAAGTGATGTGAAAAGAACAGGAACAGTATGGACAGCAGTGGCACACATAGTGACAGGAGTGATAGGGTCAGGTGTGTTGTCATTGGCATGGAGCATTGCACAAATTGGATGGATTGCAGGCCCATTGGCAAttcttctttttgcttctatcactcttctctctgcttttcttctCAGTGATACCTATCGTTCTCCTCATCCTCAATTTGGTCCTCATAGAAGCTCTTCTTATCTTGATGCTGTTAATTTGCATAAGGGAGCAGGAAATGGACGTTTCTGTGGTGTTTTTGTAAATATAAGTTTATATGGTTTTGGAATTGCCTACATTATTACTTCATCCATCAGCATAAGAGCAATCCAGGACTCAATCTGTTACCATGACAAAGGGAGTGAAGCAACATGTGGATTTACGGATACATATAACATGCTTATTTTTGGGGCTATCCAAGTTGTTCTCTCACAGATTCCCAATTTCCATAACATTGAATGGCTGTCTATTGTTGCTGCAATTATGTCATTTGCTTATGCTTTCATAGGCATGGCACTTGCCATCGTTAAAGTCAATGAAAATGGACGTTTTGAGGGTAGCATTGGAGGAGTCACAACTTCCACTGGAATGGAAAAACTATGGCTGGTTGCACAAGCACTTGGTGACATAGCCTTCTCCTATCCATTTGCAGTAATTCTTATAGAAATTCAGGACACATTGAAATCACCTCCGCCAGAAAACGTAACAATGAGGAGGGCCTCGACAATATCAGTCATCGTGACGACATTTTTCTACCTCTGTTGTGGCTGTGCTGGTTATGCAGCCTTTGGTAGTGATACACCAGGAAATCTTTTGACAGGGTTTGCAACTTATAAGCTTTATTGGCTTGTTGACTTTGCCAATGCTTGTATAGTTATTCACCTAGTTGGTGCATATCAGGTGTATAGCCAGCCACTTTATGCAAATGTGGAAAATTGGTTACGTTTTAAATTCCCAGACAGTGGATTTGTGAATTACTCATACAACTTAAAACTCCCATTGCTGCCAGATTTCCAACTAAATCCTCTAAGGCTTTGTTTCCGAACGCTATATGTTGGATCGACGATCGTGATTGCAATGCTGTTTCCATACTTCAACCAGATTTTGGGAGTTTTGGCTGGCATAATATTTTATCCATTAACCATATATTTCCCAGTGGAAATGTATTTGAGTCAAGGCAATATTGAAGCATGGACAACCAAGTGGATATTGCTAAGGACTTTTAGCATTGTTGGCTTTGTGGTGGGATTGTTCACTCTCATTGGTTCCATTCAAGGGATTGTATCTGCAGAACTTAAGTGA 1398 0.3927 MSGEFSSGALDSTPFLHNQYAESSDVKRTGTVWTAVAHIVTGVIGSGVLSLAWSIAQIGWIAGPLAILLFASITLLSAFLLSDTYRSPHPQFGPHRSSSYLDAVNLHKGAGNGRFCGVFVNISLYGFGIAYIITSSISIRAIQDSICYHDKGSEATCGFTDTYNMLIFGAIQVVLSQIPNFHNIEWLSIVAAIMSFAYAFIGMALAIVKVNENGRFEGSIGGVTTSTGMEKLWLVAQALGDIAFSYPFAVILIEIQDTLKSPPPENVTMRRASTISVIVTTFFYLCCGCAGYAAFGSDTPGNLLTGFATYKLYWLVDFANACIVIHLVGAYQVYSQPLYANVENWLRFKFPDSGFVNYSYNLKLPLLPDFQLNPLRLCFRTLYVGSTIVIAMLFPYFNQILGVLAGIIFYPLTIYFPVEMYLSQGNIEAWTTKWILLRTFSIVGFVVGLFTLIGSIQGIVSAELK 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01201 465 Pfam Transmembrane amino acid transporter protein 28 460 IPR013057 -
Car05g01201 465 PANTHER OS05G0424000 PROTEIN-RELATED 10 463 - -
Car05g01201 465 Gene3D Amino acid/polyamine transporter I 25 340 - -
Car05g01201 465 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 10 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01201 Car-Chr5 54993482 54997141 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01201 20 460 Organic Solute Cotransporters AT5G09220 48.198 3.05e-156 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01201 K24917 - gmx:100801302 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01201 05 54993482 54997141 Car05g01201 05 54993482 54997141 ECH
Car05g01201 05 54993482 54997141 Car02g02175 02 51936910 51941773 PCT