Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02175 ATGGGAACAGCATCTTCTGATTCAAGTGACACCAACATCCCTTTGTTACTCACTCAATCGAATCCTATCAAAAGAACAGGGACTGTATGGACAGCAGTTGCACACATAGTGACAGGGGTGATAGGATCAGGAGTGTTATCTCTTCCATGGAGCATTGCACAACTTGGTTGGCTTGTGGGACCATTATCCATActccttattgcttcttcaactctcttctctgcttttcttctATGCAATACATATCGATCACCGAACCCTGAATATGGTCCTCACAGGAGTGCCTCTTATCTTGATGTTGTCAATTTTAATTTAGGAACAGGGAATGGAAGACTTTGTGGCCTGCTTGTGAATATATGTTTATATGGTTTTGGAATTGCCTTTGTCATTACAACATCTATCAGCTTAAGATCAATCCAAGACTCAATTTGTAACCACAACAATGGGAGTGAAACAACAAGTGAACTTGCAGATGCATATTATATGCTGCTTTTTGGGATTGTCCAAATTTTTCTATCACAGATACCAAACTTACATAACATCAATTGGCTCTCAGTTCTCGCTGCGATTATGTCATTTGCTTATTGTTTCATAGGAATGGGGCTTTCCATCATGCAAATCATAGAAAATGGATATGCTAAGGGTAGTATTGAAGGAGTCAGTACTTCTAGTGGAACTCAGAAGTTGTGGTTAGTTTCCCAGGCACTTGGGGACGTGTCATTCTCCTATCCTTTCTCGACAATTATTATGGAAATACAGGATACTTTGAAGTCACCTCCACCAGAAAACCAAACCATGAAAAAGGCCTCAGTAATATCAGTAGCTATCACAACATTTTTTTACCTCTGCTGTGGAAGTGCTGGTTATGCTGCATTTGGCAATGATACACCAGGAAACCTTTTAACAGGATTCGGATCCTCCAAGTTGTATTGGCTGTTGGACTTTGCTAATGTTTGTATAGTGGTTCACTTAGTTGGTTCATATCAGGTATACAGCCAGCCACTTTTTGCCAATGCCGAGAATTGGTTCCGTTTTAAATTCCCTGACAGCGAATTTGTGAATAACACATATACCTTGAAACTTCCTTTGCTGCCGGCTTTTGACTTAAGTTTTCTCAGCCTGTCATTCCGAACTGCTTATGTTGCATCAACGACCTGTTATGCAGGTCAGGTTTTTGAATTTGGAACCACACCCTCACCTACAATTTTGACAGAACTCACTTTTGGCACCTGTGGAAAGTATCCACCACTGGAAAATAAATGA 1263 0.3919 MGTASSDSSDTNIPLLLTQSNPIKRTGTVWTAVAHIVTGVIGSGVLSLPWSIAQLGWLVGPLSILLIASSTLFSAFLLCNTYRSPNPEYGPHRSASYLDVVNFNLGTGNGRLCGLLVNICLYGFGIAFVITTSISLRSIQDSICNHNNGSETTSELADAYYMLLFGIVQIFLSQIPNLHNINWLSVLAAIMSFAYCFIGMGLSIMQIIENGYAKGSIEGVSTSSGTQKLWLVSQALGDVSFSYPFSTIIMEIQDTLKSPPPENQTMKKASVISVAITTFFYLCCGSAGYAAFGNDTPGNLLTGFGSSKLYWLLDFANVCIVVHLVGSYQVYSQPLFANAENWFRFKFPDSEFVNNTYTLKLPLLPAFDLSFLSLSFRTAYVASTTCYAGQVFEFGTTPSPTILTELTFGTCGKYPPLENK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02175 420 Gene3D Amino acid/polyamine transporter I 23 341 - -
Car02g02175 420 Pfam Transmembrane amino acid transporter protein 25 356 IPR013057 -
Car02g02175 420 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 4 388 - -
Car02g02175 420 PANTHER OS05G0424000 PROTEIN-RELATED 4 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02175 Car-Chr2 51936910 51941773 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02175 24 385 Organic Solute Cotransporters AT1G77380 49.451 1.44e-122 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02175 K24917 - gmx:100788056 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02175 02 51936910 51941773 Car02g02175 02 51936910 51941773 ECH
Car05g01201 05 54993482 54997141 Car02g02175 02 51936910 51941773 PCT