Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01089 ATGATCATGGATTCTCCACAATCTGTTGTGTCACCCTTCAGGAGCTCAATCTTGGGTGAGGGTGAGAAGCACAAGTCTGAAAATGTTTTCACACAAAGCAATGGTCCCGCCTCTAAGGACATTGAAGTCAATGGGAAGGAAACTATCATGTCAAATGCTGAGGAATGTCTTGGGGTGCTTGACGTCTGTATACATCAGGCTAGGGACATTCAAAACATCTGCATATATCATAAGCAAGATGTTTATGCCAAGATTTGTTTGACGAGTCATCCCGAGAATAGCGAATCTACGAAGACCATCAATGGAGGAGGAAGGAACCCTGTGTTTAACGACAATCTTCGTCTCAATGTTTGGAACGTCGATTCTTCTCTCAAATGTGAGATATGGATGCTGAGCAGGGTGAAGAATTATCTTGAAGATCAATTGCTTGGTTTTGCTTTGGTACCGTTATCTGAAGTACTAGTTCAAAATGGGAAACTAGAGAAAGAATTCTCTCTTTCTTCAACCGATCTATTTCATTCTCCTTCAGGTTTTGTTCAGTTGTCGCTTTCTTACACCGGTGCGACACCTGATGTTATGGCAATATCTGCAATGCCTGGGGAGGCGGCTACACATGACACTTTGCAGGACTCGGAGACATCCGAGTTGTTAGCTAGAGATTTGGATAAAATTGAGTTTCCAGATCCTAAGATTGTAAATGAAGACCACTTAATGGTTTCAGAATATTTCGGCATTTCATGTGACGAGACTCAGTGTTCTGATAGCTTGAACACTTCTGATGCTGAAAATCATAGTTCCGAAGCAGGCATTCGGCTTGTGGAAAGCTTCTCAGCATGCAGTGTTGAGTCTGTGCAACCTCCTAAGGTTGATTCTCCTCCGAGCAGTTTGTCGACAAATGGAGTTTCTTCCCCTTCTGCACCTGAAAGCTCAGAATCATCTGATGCTGCAGCTTCTAAGTCTCCAGGTCAAGAACAAGTTTCAGGCACCGAAGAGGTAAAAAAAGTGGATGTCAAAGATGGTGAGAGCGATTCCTCAAGTGCTGTTCCAAGTGATTTATTCCCAAAGCCTTTTGTGAATGTGAACATCGAGCCAGAGCCGACAATGGTGCAACAGGATATAGTAGACATGTATATGAAAAGTATGCAGCAATTTACCGAGTCATTAGCGAAAATGAAGCTTCCTATGGACGTTGAAAGTGAGCCTACTAGTTCGGGAAATTCAAGTACCGAGCAGAAACTACCGCCATCTAAGAACGGTAGCTCCCGTGTCTATTATGGGAGCAGAGCTTTCTTTTGA 1296 0.4329 MIMDSPQSVVSPFRSSILGEGEKHKSENVFTQSNGPASKDIEVNGKETIMSNAEECLGVLDVCIHQARDIQNICIYHKQDVYAKICLTSHPENSESTKTINGGGRNPVFNDNLRLNVWNVDSSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVQNGKLEKEFSLSSTDLFHSPSGFVQLSLSYTGATPDVMAISAMPGEAATHDTLQDSETSELLARDLDKIEFPDPKIVNEDHLMVSEYFGISCDETQCSDSLNTSDAENHSSEAGIRLVESFSACSVESVQPPKVDSPPSSLSTNGVSSPSAPESSESSDAAASKSPGQEQVSGTEEVKKVDVKDGESDSSSAVPSDLFPKPFVNVNIEPEPTMVQQDIVDMYMKSMQQFTESLAKMKLPMDVESEPTSSGNSSTEQKLPPSKNGSSRVYYGSRAFF 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01089 431 MobiDBLite consensus disorder prediction 399 423 - -
Car05g01089 431 Gene3D C2 domain 54 215 IPR035892 -
Car05g01089 431 MobiDBLite consensus disorder prediction 283 327 - -
Car05g01089 431 PANTHER EXPRESSED PROTEIN 3 431 - -
Car05g01089 431 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 57 187 IPR035892 -
Car05g01089 431 MobiDBLite consensus disorder prediction 395 431 - -
Car05g01089 431 SMART C2_3c 59 162 IPR000008 -
Car05g01089 431 ProSiteProfiles C2 domain profile. 45 164 IPR000008 -
Car05g01089 431 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 3 431 - -
Car05g01089 431 MobiDBLite consensus disorder prediction 283 356 - -
Car05g01089 431 Pfam C2 domain 58 165 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01089 Car-Chr5 52507349 52510242 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01089 - - gmx:100804602 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01089 05 52507349 52510242 Car05g01089 05 52507349 52510242 ECH
Car05g01089 05 52507349 52510242 Car02g02096 02 51297049 51299896 PCT