Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02096 ATGGAATCTCCACAATCTATTGTGTCACCATTCAAGAGCATTGTCCTAGGAGATGTTGAGAAGTATAAGTCTGATGTTTTAACACAAAGCTCTAGCCCTTTGTCTAAGGACATTGAAGTCAATGGAAAAGAAACTTTTGTTGTGTCTAATAAAGAGGAATTCATTGGTGTAGTTGATGTTTACATACATCAAGCTAGAGACATTCATAACATTTGCATATATCACAAGCAAGATGTTTATGCTAAGATTTGTTTGACTAATGATCCTGAAAATTCTGTCTCTACTAAGATTATCAATGGTGGAGGAAGGAACCCTGTGTTTAACGATAACCTTCGTCTAAGTGTTCGGACGGTTGATTCTTCTCTCAAATGTGAGATTTGGATGCTGAGTAGGGTGAAGAATTATCTTGAAGACCAATTGCTTGGTTTTGCTATGGTACCTTTGTCTGAAGTATTGATCATGAAGGATGGAAAATTAGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTATTCCATTCCCCGGCCGGTTTTGTTCAATTGTCACTTGCTTACAACGGTGCTTCCCCCGATGTTATGGCTATTTCTGCAATGCCTACTAGTGAATTAGACCAAAATAGCACCGAAAAGGACTCCGAAACACGCGAGTCGATTGTGAGAGATTTAGATAAAATTGAATTCCCTGACCCGAAAATTGCAAATGAAGACCACTTAATGGTTTCGGAATACTTTGGCATACCATGTGAGGACAGTAAATGTACTGATAGCTTAACCACTACTGATACTGAAAATCTCAGTCCCGAAGCCGGTGTTCAACTTGTCAAAAGCTTCTCAGCATGCAGTGTTGAATCTTTCCAACCTCATAAGGTTGAGTCTCCACCTAGCAGCATGTCGACAAATGGAGTTTCCTCTCCTTCGGCAGCTGCAAGATCAGATGAGCAAGTTTCTGGCACCAAAGAGAAAAGTGTTGATGTAAAAGACAGTGAGAGTGATTCGACAAACACATTGCATAATGAGTTATTTCCAAAGCCTGCTGTGAGTGTGAAAATTGAGCCAGAACCAAAGATGGTGCAGCAGGATATTGTAGACATGTACATGAAAAGTATGCAGCAATTTACCGAGTCATTGGCGAAAATGAAGCTTCCTATGGACTTTGAAAATGGACCAACTAGTTCAGGAAACTCGAGCTCCGAACAGAAACTACAGGCGTCGAAAAGCAGTAACTCGCGCGTGTTTTATGGTAGCAGAGCTTTCTTCTGA 1257 0.4041 MESPQSIVSPFKSIVLGDVEKYKSDVLTQSSSPLSKDIEVNGKETFVVSNKEEFIGVVDVYIHQARDIHNICIYHKQDVYAKICLTNDPENSVSTKIINGGGRNPVFNDNLRLSVRTVDSSLKCEIWMLSRVKNYLEDQLLGFAMVPLSEVLIMKDGKLEKEFSLSSTDLFHSPAGFVQLSLAYNGASPDVMAISAMPTSELDQNSTEKDSETRESIVRDLDKIEFPDPKIANEDHLMVSEYFGIPCEDSKCTDSLTTTDTENLSPEAGVQLVKSFSACSVESFQPHKVESPPSSMSTNGVSSPSAAARSDEQVSGTKEKSVDVKDSESDSTNTLHNELFPKPAVSVKIEPEPKMVQQDIVDMYMKSMQQFTESLAKMKLPMDFENGPTSSGNSSSEQKLQASKSSNSRVFYGSRAFF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02096 418 SMART C2_3c 57 160 IPR000008 -
Car02g02096 418 MobiDBLite consensus disorder prediction 386 407 - -
Car02g02096 418 PANTHER EXPRESSED PROTEIN 1 418 - -
Car02g02096 418 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 418 - -
Car02g02096 418 MobiDBLite consensus disorder prediction 286 345 - -
Car02g02096 418 MobiDBLite consensus disorder prediction 313 332 - -
Car02g02096 418 ProSiteProfiles C2 domain profile. 40 163 IPR000008 -
Car02g02096 418 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 54 186 IPR035892 -
Car02g02096 418 MobiDBLite consensus disorder prediction 286 312 - -
Car02g02096 418 MobiDBLite consensus disorder prediction 382 407 - -
Car02g02096 418 Gene3D C2 domain 51 218 IPR035892 -
Car02g02096 418 Pfam C2 domain 57 164 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02096 Car-Chr2 51297049 51299896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02096 - - gmx:100781587 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02096 02 51297049 51299896 Car02g02096 02 51297049 51299896 ECH
Car05g01089 05 52507349 52510242 Car02g02096 02 51297049 51299896 PCT