Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01016 ATGGAGGCTCATGTTGCTACTTCCATTGTTTCCAAAGCGAAAACCGCTTTCCATTCTGCTGCTGTCAAAGCTGAGAGGGTTCTCATGGACTTCAAATCCGATCGAGATTCTGATAAGCAATTGGGTGATGATTATGGAAGGCAAAGACATCAGGGAGATGAATTTCCTAGGAATGAGAATGAGTCAAAGTTTCTCAATGAACTGAAGCATATAAAGTGGAGACCTCGACATATAGGAATAAAACAGGATTGGAAAGATCGAATTAACAACATACGGAAAGGAAGAAGAGAAACTGAAGATACGGGTAAAGTTGGAGATGGAAGCATGGCTGCTATTCCAATTTATGATGAAAATTTATGCATCGGTCATGTGAAAAATGATCTTGATGCCAAGGCTCCAGAAGCTATTCCCTCGGTTGAAGGCTTGACTTCTGCGGCTAAAACGCCGATTCCTCCATCTTATGTCCTGAAGCAATTGGCTATAGCTGTTGAGGCTGGAAGGAAAACAAATTCAATGAAAGATTTTGTTGCTTCATCAAGAGGTTCTTCACCTTCCACTGAAAGGACAGGCTTAAGTCTCTCTGCAGTGAAGGCTTTAGTGTTACGCGAGAAGGAGGATAAACTTACTTCTGAATTTAGTAGCAATGAGAAAGTTTTGTATTTGATTAGTTCTCTTTTTGATCCAGATGGAGAGTTCCTTAGAAGGAAGATCAACTCCAATCCAGAGGAAATTGACATAACATCTTTCATAAGAGATATTCACGGTGCTCCTCTTGAAAGCCTTGTTGTTAAGCTAGCTGAAGTAATCGGAAACTTCAAGACCCTTCGAGAAATGGCATTTTTTTGGTGCAGGGTTGTTGCTGAACTGAGAAAACTTTGGTCTGAAGAAAAATATTTACCTGGAGTTCCCTCAGATGACATTCCAGATCTTAAGTCATGTCTTCTCTATCAACATTTTCAAGTAATTAATTGTTGCATCTCTCGGAAAAGGCGCCATATCATTGCCACTGAATCTCTGGACTCTATGATGATGATGGAAGCAAATTCAAATACATTATTTGAATCAACAAACTGTAGTGACGGAACTTCTGCAAGTGCTTTATTATATGCTCGATTAATTACAGGAGAGCTTGTTCTTCGACTTGGTGCTCATTGCCCATCTGGAAATATGATGTTGGAAACCGGGGAGCCTGCATACTCTCCTATCACACAGGAAGGACCGTTGCTTACAGAAGATCTGATCAAAGAGACAGAGGAGTTTGTACTGCGGACAGGGAGTGTTGGTGCTGGTTGCTCTCAACTCCTGTCTGATATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGTATTTTGGAAGACTTCGTGAGATGGTACTCTCCTCCAGATTGGACCGAAAGTGAGTCAAGTACTGACGATAGTTGTTCTTCTGATGGTAGTTGCGAGTCATTTTCTACCAGAGGTCATCTAAGTCAAAGGATGCGAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCTAAGCCAGTACCTGCTGTGAAACAGGCACCTCTCTTTGATGAGGATTTAGCAGTGGAGGGCATCCTTGATGCATTTGAGGATATCCAGCCAGTGGAGCTTTTTGGACAGCTGTTTGTTTCACTTCTTGGTTTAGGATTTATAATTGCCGAACCTTTGCTGTCTGGTAACGATGACTTCGCAAAGTTGTTCAATGACTTCAAGGAGTATGTAGTTACAACTTGTGAAGGCATCAAATTCATTGAGAAAGTTGATGAACTTGTTCAGGTATATGAAACCGTGGAGACAATGTTGCTGAATCCAGACGAGGCACTGAGGATGATGAAGCACACAAAAGAATCAACTGTAACCACCAATGAAACAAAGAGCCGGTTCAAGCGAATTAGCCATATCTTTGGTGACAAAGATAAACTGTTGCCAAGGTCTGGGGGGAAAGATCAGACCAACGATGAAGAAAAGGCGATTCGACAATCTTTTTCAAGTTTCTTCGATGGCAAGTCATCTTTATTCTCAAAGAAGCCTCCCAAAGCAGGAAACATATTACCCGCTGAGACACATCAATCTCTGGAAAATGATTGGACAATAATTTAA 2106 0.4145 MEAHVATSIVSKAKTAFHSAAVKAERVLMDFKSDRDSDKQLGDDYGRQRHQGDEFPRNENESKFLNELKHIKWRPRHIGIKQDWKDRINNIRKGRRETEDTGKVGDGSMAAIPIYDENLCIGHVKNDLDAKAPEAIPSVEGLTSAAKTPIPPSYVLKQLAIAVEAGRKTNSMKDFVASSRGSSPSTERTGLSLSAVKALVLREKEDKLTSEFSSNEKVLYLISSLFDPDGEFLRRKINSNPEEIDITSFIRDIHGAPLESLVVKLAEVIGNFKTLREMAFFWCRVVAELRKLWSEEKYLPGVPSDDIPDLKSCLLYQHFQVINCCISRKRRHIIATESLDSMMMMEANSNTLFESTNCSDGTSASALLYARLITGELVLRLGAHCPSGNMMLETGEPAYSPITQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWTESESSTDDSCSSDGSCESFSTRGHLSQRMRKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILDAFEDIQPVELFGQLFVSLLGLGFIIAEPLLSGNDDFAKLFNDFKEYVVTTCEGIKFIEKVDELVQVYETVETMLLNPDEALRMMKHTKESTVTTNETKSRFKRISHIFGDKDKLLPRSGGKDQTNDEEKAIRQSFSSFFDGKSSLFSKKPPKAGNILPAETHQSLENDWTII 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01016 701 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 6 701 IPR045700 GO:0005096|GO:0043547
Car05g01016 701 MobiDBLite consensus disorder prediction 35 60 - -
Car05g01016 701 Pfam Rab3 GTPase-activating protein catalytic subunit 380 532 IPR026147 -
Car05g01016 701 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 6 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01016 Car-Chr5 50899615 50907615 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01016 K18270 - gmx:100800515 1009.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01016 05 50899615 50907615 Car05g01016 05 50899615 50907615 ECH
Car05g01016 05 50899615 50907615 Car02g02052 02 50970470 50976948 PCT