Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02052 ATGGAATCACCAACTTTTGTTTCGAAAGCGAGGACAGCCTTTCATTCCGCTGCTGCAAAAGCGGAGCGTGTTCTCTTAGACTTCAAATCAGATCGAGATCAAGATAAACAATCGCATAATAACTTGACGAGAAATTCTGAAGTTGAATCTCCAAGCAAGGACAACGAGTCGAAGGTTCGCAGTGAATCAAAGCATATAAAGTGGAGGCCTCCGCATTTAGGAATTAAACAAGATTGGCAAGATAAAATTAAGAACATTCGGATTGGGAGAAAAGAAGCTGAAGATACAGATAAAATTGGGGATGCAAACATGGCAATTCCATTTTATGATGAAAACTTGTATATCTTGAACGTGAAGAATGATCTTGAGGCCAAGGCTTCAGAAGCAATTCCATCTGTAGAAGGCCTTACTGCTGCGACTAAAGATCCCATTCCTGCATCCTCTGTGCTGAAGCAATTGGCTATCGCTGTTGAGGCTGGAAGTAAAACAAAGTCCATGAAAGATTTTATAGCTTCATCAGGAAATTCTTCACCTGCCAGAGAGAGGTCAGGCTTAACTCTCTCTGCAGTTAAGGCTTTAGTGTTGCGAGAAAAGGAGGATAAACTTACATCTGAGTTTAGTGGCGATGAAAAAGTTGTGCATTTGATCAATTCTCTTTTCGATCCAGAGGGAGATTTCCTTAGAAGGAAGATTGATTCCAATCCAGAGGAAAATGACATAACATCTTTGCCAAGAGATATTCACGGCGCTCCTCCTGAAAGTCTTGTTGTAAAGCTAGCTGAAATTACTGGAAACTACAAGTCCCTTCGAAAAATGGCTCTGTTCTGGTGCAGGGTTGTTGCTGAACTGAGAAAACTTTGGGATGAAGAACAATATTTACCTGGAGTCCCTCAGAATGTGAATCCAGATCTGAAAACATGTCTTCTGTATCAACATTTTCAAGTAATTAATTGTTGTATTTCTCGGAAGAGGCTCCGTATCATTGCAACTGAATCTCTAGACTCTTTGATGATGCAAGCTAGTTCAAACATGAATGAATCAACCAAGGATGATGATGGGGCTGCGGCAAGCCCTGTTTTATATGCCAAATTAAATACCGGGGAGCTTGTTCTTCGACTTGGTGCTGATTCCCCAGCTGGAGATTTGACATTGTTGGAAACTGGTGAAGCTGTGTACTCTCCCGTCACCCAGGAAGGACCTTTGCTTACAGAAGATTTAATCAGAGAAACAGAGGAGTTTGTGCTGCGGACTGGGAGTGTTGGTGCTGGCTGCTCGCAACTGCTCTCAGATATGCAGGCTTTCAAGGCTGCAAATCCTGGATGTATTTTGGAGGATTTTGTAAGATGGCACTCCCCTCCTGATTGGACAGACAATGAGACTAGTATCGAGGACACTGATGTTTTTGACGGTGGCGAGTCATTGTCAACCAGAGGTCAGCTAAGTCGGCGTATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCTAAGCCAGTACCAGCTGTTAAGCAGGCACCTCTCTTCGATGAGGATTTGGCAGTAGAGGGCATCCTCAATGCATTTGAGGACATCCATCCTTTTGAGCTTTTTGGGCAGTTGTTTGTCTCTTTACTTGGGTTAGGGTTTGCAATTGCTGAATCTATGCTGTCTAGTAACAAGGACTTCTCAAAGTTGTTCTATGACTGCAAGGAGTACATAGTTGCCACATGCCAGAGCAACAAATGGAGTGAGAAAGTCGACGACCTTGTCCAGGTATATGAAACGGTGGAGACAATGTTACTGAATCCTGAAGAAGCGTTGAAGTTGATGAAACAGACAGAAGAATCGATTGCAGTTACTGATGAACCAAAGAGCCGGTTTAAGAGGCTTAGCCTTATCTTCAGCAGCAAAGATAAAGCATTGAAAAAGCCCGTGTCAAAAGATCAAATAAATGATGAAGAAAAAACAACACGACAATCATTCTCAAGTTTCTTTGAAACTAAGTCATCTTTATTTTCAAAGAAGCCTCCTAGGTCTGGATGTCCATCTCCTTCTGAGAAACCACCTCTAGAAACTGACTGGACAATTGTTTAA 2079 0.4228 MESPTFVSKARTAFHSAAAKAERVLLDFKSDRDQDKQSHNNLTRNSEVESPSKDNESKVRSESKHIKWRPPHLGIKQDWQDKIKNIRIGRKEAEDTDKIGDANMAIPFYDENLYILNVKNDLEAKASEAIPSVEGLTAATKDPIPASSVLKQLAIAVEAGSKTKSMKDFIASSGNSSPARERSGLTLSAVKALVLREKEDKLTSEFSGDEKVVHLINSLFDPEGDFLRRKIDSNPEENDITSLPRDIHGAPPESLVVKLAEITGNYKSLRKMALFWCRVVAELRKLWDEEQYLPGVPQNVNPDLKTCLLYQHFQVINCCISRKRLRIIATESLDSLMMQASSNMNESTKDDDGAAASPVLYAKLNTGELVLRLGADSPAGDLTLLETGEAVYSPVTQEGPLLTEDLIRETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNETSIEDTDVFDGGESLSTRGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNAFEDIHPFELFGQLFVSLLGLGFAIAESMLSSNKDFSKLFYDCKEYIVATCQSNKWSEKVDDLVQVYETVETMLLNPEEALKLMKQTEESIAVTDEPKSRFKRLSLIFSSKDKALKKPVSKDQINDEEKTTRQSFSSFFETKSSLFSKKPPRSGCPSPSEKPPLETDWTIV 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02052 692 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 4 692 IPR045700 GO:0005096|GO:0043547
Car02g02052 692 MobiDBLite consensus disorder prediction 640 692 - -
Car02g02052 692 MobiDBLite consensus disorder prediction 49 69 - -
Car02g02052 692 Pfam Rab3 GTPase-activating protein catalytic subunit 372 524 IPR026147 -
Car02g02052 692 MobiDBLite consensus disorder prediction 651 671 - -
Car02g02052 692 MobiDBLite consensus disorder prediction 28 42 - -
Car02g02052 692 MobiDBLite consensus disorder prediction 28 69 - -
Car02g02052 692 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 4 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02052 Car-Chr2 50970470 50976948 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02052 K18270 - gmx:100818643 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02052 02 50970470 50976948 Car02g02052 02 50970470 50976948 ECH
Car05g01016 05 50899615 50907615 Car02g02052 02 50970470 50976948 PCT