Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00993 ATGGTTCAGATTGCGAAGAGGAAGAAAGGAAGACCGTCAAAGGCGGATCTAGCTCGCCGCTCCGCCGAATCTCCGGCCGTTACAACAGACTCCGATTCTCGGCGTAGCCTCCGCCGCCGTAACGCGAGGTACAACATAATCGACTACGACGGCGATTACATCGATGAAGACGAAGAGGATGAGCGGAAACGCGAGAAGAAGAAGCTTAAACTCATGGCGAAGCTACACCATGGCGAACAAGAGCAAGAATTTGAAGATCACGCGCCAATGgaagaagaagagtgcgatgaaatcgaaggtggggaagagaacgaagatgcagaagtaaagcacgaagaagacgaTGCGATAAAGGGCACAAAAGTGGATTTTAAAGGGCTCCACTATGTTTCTGTTTCAGGAACTCCAGCCAATTCTCCATATGGGATTCCATTGCCTGATAAGAAGATTTTGGATTTGATCCTTGACAAGCTTCAGAAAAAGGATATATATGGTGTGTTTGCAGACCCTGTTGATCCAGAAGAGCTTCCTGATTATCACGATGTGATTGAGCATCCCATGGATTTTGCCACAGTGAGGAACAAGTTGGCTAATGGATCTTATTCTACCTTAGAACAATTTGAGAATGATGTATTTTTAATTTGCTCAAACGCAATGCTATACAATGCACCAGAGACTGTATACCACCGACAGGCACGAACGATACAAGAACTTGGGCGGAAGAAGTTTGAGAAGTTAAGGACTAAATTCGAACGTTCTCAGTTTGAGCTAAAATCAGAACAAAAAACACGGTCGAATTCTTTGGTTAAGAAGTCATTGAAAAAGACACCAGGTTGTGCCTCACAGGAACCTGTTGGCTTTGATTTCTCTTCTGGCGCTACTCTGGCTACTATTGGAGATATACAGCCAACTTTCCATCCAATGCAAGGTGGTAGCTGTGAGAGGCCTGGAAACATTGATGGTATTGTGGAAGGGAATACTTTCTTGATTGATGCAAATCAAGAGAAATCTGAAGATGTTTTGACAGGGAAGAGTATGCTCTATAAGTTGGGAAGGAAGTCATTTGTACTTGATGACAATCGTCGTGCATCTTATAATATGCCTAATCAACCAATCAGTAGATCAGATTCAACATTTATGACCTTTGAGAGTGGAATGAGACAGCTAGTTACTGTTGGCGTTCATACTGAATATTCCTATACTAGGAGTTTGGCTCGTTTTAGTGCATCTCTAGGACCCATTGTTTGGAAAGTCGCGTCACACAGGATTCAACAGGCACTTCCTGCCAGCTGTAAATTTGGTCGTGGCTGGGTTGGAGAGTATGAACCGCTTCCAAACCCAATATATATGCTCTCTAATCATGTCCAGAAAGATACTAGTTTGATTTTGAAGTTGCATGGTGACAAAAAATTTACGGATGTGGAACCCAGCACTGAACATCCTGTAAATGGACATGTGCTTGAGGGAAAACATTCTTCAAATTGTCCTACCCGTGGGCCTGTATTTGAAGGAAATCCTTCTATTGGTTCTGCTGGAGTGAAGCCTAATCAGCAGAATGCCCAATCTAGGAATTTTGGTAAATCTGAGAATAAGAGTTTGAAAAAATTGGAGCTGAAATCTTTACCCTCAAGTAATCAAAACCATTCCAGTCTGGTTGCAAAGTTTGAAAGTAATACTCCTACAGCAGAATCTAAGCCCAATGAGATAGCGCCTAGAAATTTGAATGCTTTGCCATCTACAACTTTCAAGCAACCAGATACTAATGAAATTGTTAGTGGAGAATTGCCTGATGGAAAATTCATGAAAACAAGCTTGAATAGACGCTCGAACGGTCCATCATCTGATAGTACATCAAAGCAAACAACCAGAGCAGCAGCTCCTTTTGTTGTCCGTGGACAGGAACAGGGTGTCAGTGACCCAGTTCAGTCGATGAGAATGTTTACAGAAGAGGCTCAAAAGCAACAGACTTCTTCTAACCATTCACCAGTAGGTACTCTGCCAGAAAAGCCATCAATTCCATCTGATCAAAGAGATAACTTGGGTAATGCTTCAACAGAAGCTGCTCGTGCATGGATGTCTGCAGGGGCAGGAGGGTTTAAACTAGGACCTGAAAATACTGGTTCACCCAAAAATCAGATTTCTGCAGATTCTTTTCACAACTTACCAAGAGAGTTCCATCAGCATATTTCGCGAATTCGGGGTGAGTCTCCTGGTGGAATGTCATTCCAATCAGATAAGAACAATTTTCCATTTCATGCACCTAGACCTCAACCTATTCACACAGGTGCCGTCTCGCAGTTCTCCAACCAACCTATGGTTTTCCCTCAATCAACATCTGCTGACCAACCTAGATTTCAAATGCAGTCCCCTTGGCGAGGTCTCAGTCCTCGTAGCCAATCGAGGCAGAAACAGGAAACCTTTCCGCCTGACTTGAATATTGATTGTCAATCTCCAGGGTCACCTGCAAAACAATCTTCTGGTACCATCGATTCACCGCAACCAGACCTAGCTTTGCAACTATGA 2523 0.4205 MVQIAKRKKGRPSKADLARRSAESPAVTTDSDSRRSLRRRNARYNIIDYDGDYIDEDEEDERKREKKKLKLMAKLHHGEQEQEFEDHAPMEEEECDEIEGGEENEDAEVKHEEDDAIKGTKVDFKGLHYVSVSGTPANSPYGIPLPDKKILDLILDKLQKKDIYGVFADPVDPEELPDYHDVIEHPMDFATVRNKLANGSYSTLEQFENDVFLICSNAMLYNAPETVYHRQARTIQELGRKKFEKLRTKFERSQFELKSEQKTRSNSLVKKSLKKTPGCASQEPVGFDFSSGATLATIGDIQPTFHPMQGGSCERPGNIDGIVEGNTFLIDANQEKSEDVLTGKSMLYKLGRKSFVLDDNRRASYNMPNQPISRSDSTFMTFESGMRQLVTVGVHTEYSYTRSLARFSASLGPIVWKVASHRIQQALPASCKFGRGWVGEYEPLPNPIYMLSNHVQKDTSLILKLHGDKKFTDVEPSTEHPVNGHVLEGKHSSNCPTRGPVFEGNPSIGSAGVKPNQQNAQSRNFGKSENKSLKKLELKSLPSSNQNHSSLVAKFESNTPTAESKPNEIAPRNLNALPSTTFKQPDTNEIVSGELPDGKFMKTSLNRRSNGPSSDSTSKQTTRAAAPFVVRGQEQGVSDPVQSMRMFTEEAQKQQTSSNHSPVGTLPEKPSIPSDQRDNLGNASTEAARAWMSAGAGGFKLGPENTGSPKNQISADSFHNLPREFHQHISRIRGESPGGMSFQSDKNNFPFHAPRPQPIHTGAVSQFSNQPMVFPQSTSADQPRFQMQSPWRGLSPRSQSRQKQETFPPDLNIDCQSPGSPAKQSSGTIDSPQPDLALQL 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00993 840 MobiDBLite consensus disorder prediction 603 624 - -
Car05g00993 840 MobiDBLite consensus disorder prediction 636 665 - -
Car05g00993 840 PANTHER BROMODOMAIN CONTAINING PROTEIN 1 840 - -
Car05g00993 840 Pfam Bromodomain 154 233 IPR001487 GO:0005515
Car05g00993 840 MobiDBLite consensus disorder prediction 76 114 - -
Car05g00993 840 MobiDBLite consensus disorder prediction 557 687 - -
Car05g00993 840 MobiDBLite consensus disorder prediction 761 840 - -
Car05g00993 840 MobiDBLite consensus disorder prediction 474 530 - -
Car05g00993 840 ProSiteProfiles Bromodomain profile. 159 229 IPR001487 GO:0005515
Car05g00993 840 MobiDBLite consensus disorder prediction 510 527 - -
Car05g00993 840 MobiDBLite consensus disorder prediction 557 588 - -
Car05g00993 840 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 1 840 - -
Car05g00993 840 MobiDBLite consensus disorder prediction 1 41 - -
Car05g00993 840 CDD Bromodomain 147 243 - -
Car05g00993 840 MobiDBLite consensus disorder prediction 85 110 - -
Car05g00993 840 SMART bromo_6 140 248 IPR001487 GO:0005515
Car05g00993 840 MobiDBLite consensus disorder prediction 733 840 - -
Car05g00993 840 Gene3D - 146 267 IPR036427 GO:0005515
Car05g00993 840 PRINTS Bromodomain signature 162 175 IPR001487 GO:0005515
Car05g00993 840 PRINTS Bromodomain signature 176 192 IPR001487 GO:0005515
Car05g00993 840 PRINTS Bromodomain signature 192 210 IPR001487 GO:0005515
Car05g00993 840 PRINTS Bromodomain signature 210 229 IPR001487 GO:0005515
Car05g00993 840 SUPERFAMILY Bromodomain 136 250 IPR036427 GO:0005515
Car05g00993 840 ProSitePatterns Bromodomain signature. 165 221 IPR018359 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00993 Car-Chr5 50736260 50742515 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00993 K22184 - gmx:100799986 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00993 05 50736260 50742515 Car05g00993 05 50736260 50742515 ECH
Car05g00993 05 50736260 50742515 Car02g02049 02 50936391 50942678 PCT