Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02049 ATGGGTCAGATCGTGAGGAGGAAGAAGAAAGGACGTCCTTCTAAGGCAGATCTAGCTCGCCGTTCCGGTCAATCTCCGGCGACTTCTCAATCCGACCTACGACGGAGCCGTCGACGGCGAAATGTCAGATATAACATagactacgacgattacctagacgaagaagacgaggatgaagatgaagacgagagaaggcgcgagaagaagaagCTCAAGCTTGTGGAGAagctcaaccaaggtgtagacgatgaagaagatgaagatgaAGACGAGTCGGCGCCCAGTCGCGGTAGGTCGCGTGTGGCACACGCGCCCGAGTCAGAGAAAAGAAAATTGTTaagaaaaaagaatgatgatagggatgaggaagatgaagaagaggaagaagaagGGGaagaagtagaagaagaagaagaagaagaagaagaagaagcagaagttgAAGGGaatgaaaatgaaaatgcagaggaacacgaagacgaaggtgaaagtgaaaggggtgagGTTAATGGCACAAAAGTTGATTCCAAAGGGCTCCAATCTGTTACAGGAACCCCTTTGAAGGTTTTGTCTGAGATTCCGTTGCCTGATAAGAGGACTCTTGAATTGATCCTTGACAAGCTTCAGAAGAAGGACACGTATGGTGTGTATGCAGAGCCGGTTGATCCAGAAGAGCTTCCTGATTATCACGATGTGATTGATAATCCTATGGACTTCGCCACCGTGCGTAAAAAGTTGGCGAATGGATCTTACCCTACATTGGAACAATTTGAGAGTGATGTTTTATTGATTTGCTCAAATGCAATGCAATACAATGCGCCGGAGACTATATACCACAAACAGGCACGTTCAATACAAGAACTAGCTAGAAAGAAGTTTGAGAAGTTAAGGATCAACTTTGAACGCTCTCAGAGTGAGCTGAAATCTGAACAAAAAACCAGAACGAATTCCTTAGGTAATAAGCTAGGAAGAAGGCCTCTGGGTTATGCTTCACAGGAACCTGTTGGCTCTGATTTCTGTTCTGGCGCAACTCTTGCTACTATTGGAGATGTACTGCCAAATTCCCACCCAATGCAAGGGATCGTCTGTGAAAGACCTGGCAACATCAATGGCCTTGTAGAGGGGAATGCTTTCTTGATCGATGCTAATCAAGAGAAAGCAGAAGACTCCATATCAGGGAAAGGCCTTCTCTCCAAGTCAGGAAGAAAATCATTTGTGCAAGATTATGAACGCCGTGCTACTTATAATATGTCTACTCTACCAATTACTAGATCTGATTCAGTATTTTCGACTTTTGAGAGTGAAATTAAGCAGTTAGTTACAGTTGGACTTCAAGCTGAATATTCCTATGCCAGGAGTTTGGCTCGTTTTGCTGCAACTCTAGGACCTACTGCTTGGAGAGTAGCTTCTCGGAGGATTCAACAGGCACTGCCATCTGACTGTAAATTTGGTCGAGGTTGGGTTGGAGAGTATGAACCACTTCCAACCCCAGTATTAATGCTTGATAACCGTGTCCAGAAACAACCTAGTCTGGCAACAAAGTTGCAGTCTACTACTAAATCGACAAAGGTCCGCAAAAATGGCAAGAATGTAGAATCCTCCTTGGAACATTCTGTCAATGAACCGATGTTTGAGGTAAAACAGCCTGCAGTTTGCCCTGGTAGTGGGCTCACATCAGAAGGAAAACCATCTTTTTTTGGTTCTGCTGGAGTAAGACCAAATGCTTCTATCAATCTCACTCACCCTCAACCGAATGTCCAGACCAGGAAAGTTGGCAAGTCTGAGAATAAGGGTTTGAAACAAGTGGAGTTGAACTCTTTACCCTCGAGCGATCAGAACAATGCTAGTCTAGTTGCGAAGCTTACAAGTAACGCTCCTGCAGCTGTTTCTAAACCCAGAGAGATGGTACCAAGTAACATGAATATCTTAACATCTATGCCTTTCAAGCTGCCCGATGTCAACGGAGTCGCTAGTGGAGAGTTACCTAATGGAAAAGTCAGGAATACTAGTTTCAATAGACGAATGACTGCTCCATCATCTGAAAGTACATCAATTCAAACGGGCAGATCAGCTCCCTCTGTTACCCATGGGCTAGAGCAGAGTCTTAGCGACCCAGTTCAGCTGATGAGGATGTTAGCCGAGAAGGCTCAAAAGCAACAGGCTTCTAGTTCGTCTAATCATTCCCCCACCGAAACTCCACCAGTAACTTCATCAATTCCGTCTGGACGGAAAGAAGACTTGAGCAATGCTTCGGCAGCAGCTGCCCGTGCATGGATGTCTGTAGGAGCTGCAGGGTTTAAACAAGGACCTGAAAATTCTAGTTCACCCAAAAATCATATTTCCGCGGAGTCATTGTACAACCCAACCCGAGAGTTCCAGCAGCATCTTTCACGAATTAGAGGCGAGTTTCCTTCTGGTGGAATGCCTTACCAGTCAGAGAAGAATAACTTTCCATTTCAGCCACTTTTACCTCAACACATTCACCCAGTTGGTGTTTCACAGTTTTCAAACCGACCTATGGTTTTCCCTCAAGTAGCAGCTTCCGACCTATCAAGATTTCAAATGCAGCCGCCTTGGCAAGCTGTCCGGCCTCATAGTCAACCAAGACAAAAACAAGAAACACTTCCTCCCGACTTGAATATTGGTTTCCAATCACCCGGGTCCCCTGCCAAACAGTCTTCTGGTGTGATGGTTGACTCACAGCAACCAGACCTGGCTTTGCAGCTATGA 2730 0.4121 MGQIVRRKKKGRPSKADLARRSGQSPATSQSDLRRSRRRRNVRYNIDYDDYLDEEDEDEDEDERRREKKKLKLVEKLNQGVDDEEDEDEDESAPSRGRSRVAHAPESEKRKLLRKKNDDRDEEDEEEEEEGEEVEEEEEEEEEEAEVEGNENENAEEHEDEGESERGEVNGTKVDSKGLQSVTGTPLKVLSEIPLPDKRTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIDNPMDFATVRKKLANGSYPTLEQFESDVLLICSNAMQYNAPETIYHKQARSIQELARKKFEKLRINFERSQSELKSEQKTRTNSLGNKLGRRPLGYASQEPVGSDFCSGATLATIGDVLPNSHPMQGIVCERPGNINGLVEGNAFLIDANQEKAEDSISGKGLLSKSGRKSFVQDYERRATYNMSTLPITRSDSVFSTFESEIKQLVTVGLQAEYSYARSLARFAATLGPTAWRVASRRIQQALPSDCKFGRGWVGEYEPLPTPVLMLDNRVQKQPSLATKLQSTTKSTKVRKNGKNVESSLEHSVNEPMFEVKQPAVCPGSGLTSEGKPSFFGSAGVRPNASINLTHPQPNVQTRKVGKSENKGLKQVELNSLPSSDQNNASLVAKLTSNAPAAVSKPREMVPSNMNILTSMPFKLPDVNGVASGELPNGKVRNTSFNRRMTAPSSESTSIQTGRSAPSVTHGLEQSLSDPVQLMRMLAEKAQKQQASSSSNHSPTETPPVTSSIPSGRKEDLSNASAAAARAWMSVGAAGFKQGPENSSSPKNHISAESLYNPTREFQQHLSRIRGEFPSGGMPYQSEKNNFPFQPLLPQHIHPVGVSQFSNRPMVFPQVAASDLSRFQMQPPWQAVRPHSQPRQKQETLPPDLNIGFQSPGSPAKQSSGVMVDSQQPDLALQL 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02049 909 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 1 909 - -
Car02g02049 909 MobiDBLite consensus disorder prediction 1 180 - -
Car02g02049 909 MobiDBLite consensus disorder prediction 62 79 - -
Car02g02049 909 MobiDBLite consensus disorder prediction 859 909 - -
Car02g02049 909 MobiDBLite consensus disorder prediction 716 745 - -
Car02g02049 909 PRINTS Bromodomain signature 226 242 IPR001487 GO:0005515
Car02g02049 909 PRINTS Bromodomain signature 242 260 IPR001487 GO:0005515
Car02g02049 909 PRINTS Bromodomain signature 260 279 IPR001487 GO:0005515
Car02g02049 909 MobiDBLite consensus disorder prediction 304 326 - -
Car02g02049 909 MobiDBLite consensus disorder prediction 576 592 - -
Car02g02049 909 MobiDBLite consensus disorder prediction 121 163 - -
Car02g02049 909 MobiDBLite consensus disorder prediction 510 537 - -
Car02g02049 909 MobiDBLite consensus disorder prediction 658 699 - -
Car02g02049 909 MobiDBLite consensus disorder prediction 713 751 - -
Car02g02049 909 Pfam Bromodomain 203 283 IPR001487 GO:0005515
Car02g02049 909 MobiDBLite consensus disorder prediction 663 699 - -
Car02g02049 909 ProSitePatterns Bromodomain signature. 215 271 IPR018359 -
Car02g02049 909 CDD Bromodomain 197 293 - -
Car02g02049 909 MobiDBLite consensus disorder prediction 92 120 - -
Car02g02049 909 ProSiteProfiles Bromodomain profile. 209 279 IPR001487 GO:0005515
Car02g02049 909 MobiDBLite consensus disorder prediction 1 15 - -
Car02g02049 909 MobiDBLite consensus disorder prediction 576 595 - -
Car02g02049 909 Gene3D - 196 317 IPR036427 GO:0005515
Car02g02049 909 Coils Coil 109 160 - -
Car02g02049 909 MobiDBLite consensus disorder prediction 510 524 - -
Car02g02049 909 SMART bromo_6 190 298 IPR001487 GO:0005515
Car02g02049 909 PANTHER BROMODOMAIN CONTAINING PROTEIN 1 909 - -
Car02g02049 909 Coils Coil 293 313 - -
Car02g02049 909 SUPERFAMILY Bromodomain 192 296 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02049 Car-Chr2 50936391 50942678 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02049 K22184 - gmx:100799986 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02049 02 50936391 50942678 Car02g02049 02 50936391 50942678 ECH
Car05g00993 05 50736260 50742515 Car02g02049 02 50936391 50942678 PCT