Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00924 ATGAACTTAAGTATATATAAAAATACCATTGTAGTAAGTATATCTAATTCTAACATTACAACTCAAATTTCACAATATATCTTTGTGGGCTTCAATCTACTAACCACAAGATTTGACTACCTCAACTACTTCATCATGGGGGTCATTGGAATGATGGCAAGATATTTGGATACAATAATAGGGCCAGGAGTAATGCTTCTTTATCCTTTATACGCATCAATGAGGGCAATTGAGAGTCCTTCAACCTTAGATGATCAACAGTGGCTAACATATTGGGTTTTATACTCCTTCATGACCCTCTTTGAGCTTTCATTTTATAAGATCCTACCATGGTTTCCCATTTGGCCATACATGAAGCTTGTGCTTTGTGTGTGGCTAGTATTGCCAATGTTCAATGGAGCTGCTTATATTTATGAGAACTATGTAAGGCAATATGTAAAACATATAGGAACCTATGGTGGTTTTAATAAGTATCCAGAGGAGCAAAAGAAAGTGCTTCAAATGATTAGCTTTGATGCAAGAAAATCTGTTGAACGTTACATAGATAGATATGGTCCTGATGCATTTGAGAGAGTAATCAGAGTGGCTGAGAAAGAAGCAAGGAAGCACTAA 612 0.3595 MNLSIYKNTIVVSISNSNITTQISQYIFVGFNLLTTRFDYLNYFIMGVIGMMARYLDTIIGPGVMLLYPLYASMRAIESPSTLDDQQWLTYWVLYSFMTLFELSFYKILPWFPIWPYMKLVLCVWLVLPMFNGAAYIYENYVRQYVKHIGTYGGFNKYPEEQKKVLQMISFDARKSVERYIDRYGPDAFERVIRVAEKEARKH 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00924 203 PANTHER HVA22-LIKE PROTEINS 48 202 IPR004345 -
Car05g00924 203 Pfam TB2/DP1, HVA22 family 69 145 IPR004345 -
Car05g00924 203 PANTHER HVA22-LIKE PROTEIN 48 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00924 Car-Chr5 49051154 49053506 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00924 K17279 - gmx:100819566 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00924 05 49051154 49053506 Car02g01998 02 50431607 50433072 PCT