Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01998 ATGGGTGTCCTTGGAACAATAGTAAGACATTTAGACACAACAATAGGGCCAGGAGTAATGCTTCTTTATCCTTTATACGCATCAATGAGGGCAATTGAAAGTCCTTCAACCTTAGATGACCAACAATGGCTAACGTATTGGGTTTTATACTCTCTCATAACCCTCTTTGAGCTTTCCACTTATAAGATCCTATCTTGGTTTCCAATTTGGCCATACATGAAGCTTGTGTTTTGCGTATGGTTGGTACTGCCAATGTTCAATGGAGCAGCTTACATATATGAGAATTATGTGAGGAGATATGTCAAGAATTTTGGTAACCATGGAGGTTCCAATAATTATAATTATCCTGAGGAGTACAAAAAGGTCCTTCATATGATGACCTTCGATGCAAGAAAAGCAGTTGAACGTTATATCGATAGATTTGGTCCAGATGCATTTGAGAGAGTGATTAGAGCGGCTGAGAAAGAAGCAAAGAAGCATTGA 483 0.3872 MGVLGTIVRHLDTTIGPGVMLLYPLYASMRAIESPSTLDDQQWLTYWVLYSLITLFELSTYKILSWFPIWPYMKLVFCVWLVLPMFNGAAYIYENYVRRYVKNFGNHGGSNNYNYPEEYKKVLHMMTFDARKAVERYIDRFGPDAFERVIRAAEKEAKKH 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01998 160 PANTHER HVA22-LIKE PROTEINS 3 158 IPR004345 -
Car02g01998 160 Pfam TB2/DP1, HVA22 family 24 100 IPR004345 -
Car02g01998 160 PANTHER HVA22-LIKE PROTEIN 3 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01998 Car-Chr2 50431607 50433072 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01998 K17279 - gmx:100779435 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00924 05 49051154 49053506 Car02g01998 02 50431607 50433072 PCT
Car05g02669 05 71686816 71688190 Car02g01998 02 50431607 50433072 PCT