Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03184 ATGTCTCAAGTCTTCGGCTTTTCCGGTGATAACTTTTGCCCTTCTGGGTCAATATACACAAACCCCAAGGAAGCAAGTTTCTTCCCGTCTCTTGGTCATCAAGTTGATGCCTACTTTCCTCCTCAGAAGAGATCACGCGTCAGTGTTCCATTTGTTTTCGATGGAGAATGGTTCACGCAGAAACAAAAAACATCTATTGAATCTTTGCCAGATGAGTGCCTCTTTGAGATATTTAGAAGGTTGCCGGTAGGTGAAGAAAGGAGTTCATGTGCTTGTGTTTCCAAACGGTGGCTTATGCTTCTAAGCAATATTTGCAAGAGTGAAATCTGTAGCAACAAAAGTGATGACGAGAATAAAATGGAAGGTGTCAGTGAAGAGTTTGGAGGTGAGGGATACCTTTCCCGGAGTTTGGAAGGAAAGAAGGCAACAGATGTTAGACTTGCTGCCATTGCAGTTGGAACTGCATCACGAGGAGGATTGGGGAAGCTTTCCATCCGTGGAAGCAACTCGGGTTGCGGGGTGACTGCTCTAGGTCTCAAAGCAGTTGCTAGTGGATGCCCTTCTCTAAAGGCTCTTTCTCTATGGAATGTTTCTTCTGTTGGTGATGAAGGCCTAATTGAGATTGCTAGTGGATGTCAACAGCTAGAGAAGCTTGACCTTTGCAAATGCCCTGCAATTTCTGACAAGGCTTTAATCGCAGTTGCAAAGAACTGTCCAAATCTGACCGAGCTATCATTAGAGTCGTGCTCTAACATTCACAATGAAGGTCTACAAGCCATTGGAAAGTGCTGCCCCAATCTAAAGTCTATGTCTATCAAGGACTGTGCCGGTGTTGGTGATCAGGGAATCGCTGGCTTGTTTTCTTCAACTTCTTTGGCTCTGACAAAGGTGAAGCTCCAGGCACTGACTATTTCTGATCTCTCTCTAGCTGTTATTGGACATTATGGCAAAACAGTTACTGATCTTGTCCTTAATTTCCTCCCAAATGTTAGTGAGAGGGGATTCTGGGTTATGGGCAATGGTAATGGATTGCATAAACTGAAGTCACTCACAATTGCCTCCTGCAGAGGAGTAACAGATGTCGGCCTTGAAGCTATTGGAAAGGGTTGTCCTAATCTGAAAAGCGTTCAACTTCTTAAGTGTGCATTTCTCTCAAACAATGGATTGATTTCATTCACCAAGGCTGCTTCATCACTTGAAAGTCTACAATTGGAAGAGTGCCACCGAATTACCCAATTCGGGTTTTTCGGCGTCCTTTTTAACTGTGGTGCAAAATTGAAGGCTATTTCTCTGGCAAGTTGCTATGGAATCAAAGATCTGGACTTGGAATTGTCGCCAGTATCTCCTTGTGAATCACTTCGTTCATTATCGATCCGTAACTGCCCTGGATTTGGCAATGCTACGTTATCTGTAATGGGAAAGTTGTGCCCGCAGCTTCAACAGGTTGAGTTGACTGGACTTAAGGGAGTGAACGATGCTGGGTTGCTTCCACTGCTTGAGAGCTCTGAGGCTGGTCTGATTAAAGTTAATCTTAGCGGCTGTGTAAATCTTACAGACAAAGTAGTTTCATCCCTCGTCAATCTGCATGGTTGGACTCTTGAGCTTCTGAACCTCGAAGGATGTAAAAATATTAGCAATGCTAGCTTGGTAGCAATTGCTGAACATTGCCAATTGCTGTCTGATCTTGATGTTTCCATGTGTGCAATCTCTGATGCTGGGATAGCTTCCCTGGCACACGCCAAACAGTTAAACCTACAGGTTCTTTCTCTATCAGGTTGCACTTTGGTTACGGACAGGAGTTTGCCTGCTTTGAGAAAATTGGGCCACACCCTTTTGGGACTGAATATCCAGCATTGCAATTCAATCAGCAGCAGCGCGGTTGAAATGCTTGTGGAACTTCTTTGGAGGTGTGACATCCTCTCATAA 1926 0.4444 MSQVFGFSGDNFCPSGSIYTNPKEASFFPSLGHQVDAYFPPQKRSRVSVPFVFDGEWFTQKQKTSIESLPDECLFEIFRRLPVGEERSSCACVSKRWLMLLSNICKSEICSNKSDDENKMEGVSEEFGGEGYLSRSLEGKKATDVRLAAIAVGTASRGGLGKLSIRGSNSGCGVTALGLKAVASGCPSLKALSLWNVSSVGDEGLIEIASGCQQLEKLDLCKCPAISDKALIAVAKNCPNLTELSLESCSNIHNEGLQAIGKCCPNLKSMSIKDCAGVGDQGIAGLFSSTSLALTKVKLQALTISDLSLAVIGHYGKTVTDLVLNFLPNVSERGFWVMGNGNGLHKLKSLTIASCRGVTDVGLEAIGKGCPNLKSVQLLKCAFLSNNGLISFTKAASSLESLQLEECHRITQFGFFGVLFNCGAKLKAISLASCYGIKDLDLELSPVSPCESLRSLSIRNCPGFGNATLSVMGKLCPQLQQVELTGLKGVNDAGLLPLLESSEAGLIKVNLSGCVNLTDKVVSSLVNLHGWTLELLNLEGCKNISNASLVAIAEHCQLLSDLDVSMCAISDAGIASLAHAKQLNLQVLSLSGCTLVTDRSLPALRKLGHTLLGLNIQHCNSISSSAVEMLVELLWRCDILS 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03184 641 SMART fbox_2 69 110 IPR001810 GO:0005515
Car04g03184 641 SUPERFAMILY F-box domain 62 103 IPR036047 GO:0005515
Car04g03184 641 PANTHER EIN3-BINDING F-BOX PROTEIN 1 16 632 - -
Car04g03184 641 SUPERFAMILY RNI-like 170 414 - -
Car04g03184 641 Gene3D - 59 109 - -
Car04g03184 641 Pfam Leucine Rich repeat 555 578 IPR001611 GO:0005515
Car04g03184 641 Pfam Leucine Rich repeat 237 260 IPR001611 GO:0005515
Car04g03184 641 Pfam Leucine Rich repeat 345 366 IPR001611 GO:0005515
Car04g03184 641 Gene3D Ribonuclease Inhibitor 243 443 IPR032675 -
Car04g03184 641 SMART LRR_CC_2 530 555 IPR006553 -
Car04g03184 641 SMART LRR_CC_2 476 501 IPR006553 -
Car04g03184 641 SMART LRR_CC_2 396 421 IPR006553 -
Car04g03184 641 SMART LRR_CC_2 582 607 IPR006553 -
Car04g03184 641 SMART LRR_CC_2 264 289 IPR006553 -
Car04g03184 641 SMART LRR_CC_2 370 395 IPR006553 -
Car04g03184 641 SMART LRR_CC_2 608 633 IPR006553 -
Car04g03184 641 SMART LRR_CC_2 503 528 IPR006553 -
Car04g03184 641 SMART LRR_CC_2 212 237 IPR006553 -
Car04g03184 641 SMART LRR_CC_2 556 580 IPR006553 -
Car04g03184 641 SMART LRR_CC_2 450 475 IPR006553 -
Car04g03184 641 SMART LRR_CC_2 238 263 IPR006553 -
Car04g03184 641 SMART LRR_CC_2 186 211 IPR006553 -
Car04g03184 641 SMART LRR_CC_2 344 369 IPR006553 -
Car04g03184 641 Gene3D Ribonuclease Inhibitor 444 641 IPR032675 -
Car04g03184 641 SUPERFAMILY RNI-like 341 601 - -
Car04g03184 641 Gene3D Ribonuclease Inhibitor 160 242 IPR032675 -
Car04g03184 641 Pfam F-box-like 66 100 IPR001810 GO:0005515
Car04g03184 641 PANTHER UNCHARACTERIZED 16 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03184 Car-Chr4 60171064 60174733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03184 K14515 - gmx:100820247 1066.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03184 04 60171064 60174733 Car04g03184 04 60171064 60174733 ECH
Car04g03184 04 60171064 60174733 Car05g02956 05 74510567 74513103 PCT