Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03134 ATGGAGTTGATGGGGTGTGGAAATTTTTTAAGGGGGTGTTTTGTTGTTATGGTATTTGCTGCAACACTATTGGTGGGTCCAGTTTGTGGAATTGGTGTTAATTGGGGAACACAATCAACACACCCTTTGCCACCATCTACTGTTGTGAAAATGCTAAAAGACAATGGTATTCAGAAAGTTAAGCTTTTTGATGCTGATCCTGATATTCTGAATGCTCTAAAGAAATCTGGGATTCAGGTTATGGTTGGTATACCTAATGACTTGCTTTATACTATGGCTAATAGTCTTCAAGCAGCTGAAAAATGGGTTTCCAAGAATGTTTCAGCACATGTCTCTTCTGGAGGAGTAGATATCAGGTATGTTGCGGTGGGAAATGAGCCTTTCTTATCAACTTACAACGGTACCTTTGAAGCCACAACACTTCCGGCTCTTAAAAACATCCAATCGGCTCTTGTAAAAGCTGGTTTGGGAAACTCGGTTAGAGTCACTGTCCCTTTAAATGCCGACGTGTATCAGAGCTCATCAGATAAACCTTCCGATGGTGACTTTAGGACAGACATCCATGATCTCATGCTTCAGATTGTCAAGTTCTTGAGTCAGAACAATGCTCCATTTGCAGTGAACATCTATCCGTTTATCAGTCTTTACGCAGATCCCAATTTTCCTGTTGACTATGCATTCTTCAACGGTTTTGGTTCTCCTCTAACCGACAATGGGAATATCTACGACAATGTCTTTGACGCTAACTACGATACACTAGTATGGGCGCTGCAGAAGAATGGTTTTGGCAACCTGCCCATAATCGTAGGAGAAATTGGTTGGCCTACAGATGGAGACAGAAACGCAAATGTTCTGCTTGCACAACGTTTTAACCAAGGCTTCATGTCTCGCTTTGTTGCCGGAAAGGGAACTCCGATGAGGCCTGGTCCTATCGATGCATACTTGTTTAGCTTGGTAGATGAAGACGACAAAAGCATTCAGCCAGGTAACTTTGAACGTCATTGGGGATTGTTTTACTTCGACGGACGACCAAAATACCAGCTTAACCTCGGATTGAGAAGCAGTGGGCTAGTAGGTGCTACCGGGGTAGCACATCTGCCGAAAAAATGGTGTATCTTGAAACCCTCAGCTAACCTGAATAGCGATCAACTTGCAGAGAGTGTGTCTTACGCATGTCAAAATGCAGATTGCACTAGTCTTGGGTATGGAACTTCGTGTTCGGGTTTAGATGTCCGGGGTAACATCTCGTATGCGTTTAATAGCTACTACCAAGTGAATGATCAGATCGATAGTGCCTGCAAATTTCCCGGCCTTTCCGTTGTTACTGACAAAGATCCTTCAACTCCAGATTGCATATTCAAAATCATGATCCAAACTGATTCTGCTGGGAGAATTGGATCTCTTAGAATAGTACTCTTTGTGTTTTTGTTTTATATTATTGTGTAG 1446 0.4253 MELMGCGNFLRGCFVVMVFAATLLVGPVCGIGVNWGTQSTHPLPPSTVVKMLKDNGIQKVKLFDADPDILNALKKSGIQVMVGIPNDLLYTMANSLQAAEKWVSKNVSAHVSSGGVDIRYVAVGNEPFLSTYNGTFEATTLPALKNIQSALVKAGLGNSVRVTVPLNADVYQSSSDKPSDGDFRTDIHDLMLQIVKFLSQNNAPFAVNIYPFISLYADPNFPVDYAFFNGFGSPLTDNGNIYDNVFDANYDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANVLLAQRFNQGFMSRFVAGKGTPMRPGPIDAYLFSLVDEDDKSIQPGNFERHWGLFYFDGRPKYQLNLGLRSSGLVGATGVAHLPKKWCILKPSANLNSDQLAESVSYACQNADCTSLGYGTSCSGLDVRGNISYAFNSYYQVNDQIDSACKFPGLSVVTDKDPSTPDCIFKIMIQTDSAGRIGSLRIVLFVFLFYIIV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03134 481 Gene3D - 367 462 - -
Car04g03134 481 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 17 461 - -
Car04g03134 481 Pfam X8 domain 369 438 IPR012946 -
Car04g03134 481 SUPERFAMILY (Trans)glycosidases 31 349 IPR017853 -
Car04g03134 481 Gene3D Glycosidases 30 355 - -
Car04g03134 481 Pfam Glycosyl hydrolases family 17 31 349 IPR000490 GO:0004553|GO:0005975
Car04g03134 481 ProSitePatterns Glycosyl hydrolases family 17 signature. 265 278 IPR000490 GO:0004553|GO:0005975
Car04g03134 481 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 461 IPR044965 GO:0004553|GO:0005975
Car04g03134 481 SMART X8_cls 369 453 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03134 Car-Chr4 59511620 59514804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03134 14 468 Glycoside Hydrolase AT4G31140 69.670 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03134 K19893 - gmx:100790297 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03134 04 59511620 59514804 Car05g02449 05 69559049 69560807 PCT