Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03122 ATGGTTGAAGAGAAAGCAACGGTTACTACTGAAAATGCTACTACTACTACTGAGGAAAACGGAAAGAAGAAGCGTAATAAGAGTTTAATTTCGAGAATTTGGAAGTTTATATTTAGGTCTAATGAAAATGATTTGGAGAAGAGGCTTCAGTATATTTCGAAACAAGAAGCTTCTGTTTTGAGTAGAATGAACAAGAGATCCCGTTTCTTGAGACGAACCTCTCGCCAtattattattttttctgttttatttgagGTCATTGCCATAGCTTATGCGATTATGACAACACGATCCATGAATATGAATTGGAAAATGAGGGCGATTCGAGTTGTTCCGATGTTTCTTTTGCCTGCCTTATCATCTGCTGCTTATTCAACATTTGTAAGCTTCATAAGGATGTGTGATCGCAGGGACCAGAAAAATCTTGATAGGCTGAGAGCTGAAAGGAAGGCAAAAATTGATGAGCTCAAAGAGAAAACAAATTATTACATTACTCAACAACTCATTCAGAAATATGACACTGACCCAGCAGCAAAGGCAGCTGCTGCAGCTGTTTTGGCATACAAGTTGGGTGAAGATTCGGGTTTGAAAGTGCATATGGAAGATGAATCTAAAGTTGGGGCTCCTGCAGGAAAGTCTAACAAAGTTGAACGTGTGCAGTCTACTGGACTTCGAAATCGCAAACAAGTGCAAACTCAGTCCACTACCCCAAATCATCCTGATCAACAATTAGTTGCTTCTAGGGGAATCGATCAAACTCAGACTCTTGTGCAGAATGAACTTTTAGTTGTTGAGCATCACCAACCTCAAAGCTCAACAAAGCACTATGGAGGGTGGATTGCTCGTATTGCAGCTTTGCTTGTGGGTGAGGAGGATCCAATGCAGTCTAACGCGCTCATATGTGGTAACTGCTATATGCATAATGGTCTTGTTCGGAAAGAGGATTTCCTATTTATCACTTACTACTGCCCCCACTGTCACGCACTGAACAAACCAAAGCAATTGGCTGAGACCATCTCCGCTTCTAATTTGCCTAACACGGAGCCCCCAAAAACAAATGACGGAGAGGCAGTTAAAAATGCTAGTATTTGTGCTTCTGACAGCTTGGTTAGAAACATTAAACCTGTAAATGAGACCCCTGTGATTGAGCACATATCTGAAGAGGATAGTTTAGTGAAAGAAGAAAGCCAGTGA 1194 0.4045 MVEEKATVTTENATTTTEENGKKKRNKSLISRIWKFIFRSNENDLEKRLQYISKQEASVLSRMNKRSRFLRRTSRHIIIFSVLFEVIAIAYAIMTTRSMNMNWKMRAIRVVPMFLLPALSSAAYSTFVSFIRMCDRRDQKNLDRLRAERKAKIDELKEKTNYYITQQLIQKYDTDPAAKAAAAAVLAYKLGEDSGLKVHMEDESKVGAPAGKSNKVERVQSTGLRNRKQVQTQSTTPNHPDQQLVASRGIDQTQTLVQNELLVVEHHQPQSSTKHYGGWIARIAALLVGEEDPMQSNALICGNCYMHNGLVRKEDFLFITYYCPHCHALNKPKQLAETISASNLPNTEPPKTNDGEAVKNASICASDSLVRNIKPVNETPVIEHISEEDSLVKEESQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03122 397 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 12 389 - -
Car04g03122 397 MobiDBLite consensus disorder prediction 215 242 - -
Car04g03122 397 Coils Coil 139 162 - -
Car04g03122 397 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 12 389 IPR040115 GO:0071786
Car04g03122 397 MobiDBLite consensus disorder prediction 203 242 - -
Car04g03122 397 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 279 330 IPR019273 -
Car04g03122 397 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03122 Car-Chr4 59332357 59336841 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03122 K23292 - gmx:100815496 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03122 04 59332357 59336841 Car05g03027 05 75128447 75139250 PCT