Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02308 ATGGATGGTATAAGTAATGAGGCTAGTGTTGATCCTTTTTCAATTGGTCCTTCGGGCATTCTTGGCCGAACAATTGCTTTCAAGGTTCTTTTCTGTAAGTCTATGTTACATTTGAGGCATCAAATGTTTATGGGGTTATTGGATGTGATTCGTAGGTTTAAGAGATTTTGGGGACCTATTATATCATGGTTGCATCCAAGAAACCCTCAAGGGATATTGGCAATGATGACGATTGTCGCATTCTTGTTGAAACGATACAGTAATGTGAAGGTAAGGGCTGAATTGGCATATAGGAGGAAATTTTGGAGAAATCTGATGAGAACAGCATTGACTTATGAGGAGTGGGCTCATGCAGCTAAGATGCTTGATAAAGAGACACCAAAGATGAATGAATTGGATTTTTATGATGTTGAATTGGTGACGAACAAGCTTGAAGAGTTACGACAGCGTAGACAAGAGGGGTCTCTTAGAGATATTATATTTTGTATGAGAGCTGATCTTGTTAGAAATCTAGGCAATATGTGTAACCCTGAGCTTCACAAAGGTAGGCTTCATGTGCCTAGACATATCAAGGAGTATATTGATGAGGTATCTACTCAGTTGCGAATGGTTTGTCACTCTGATTCGGAGGAACTTGCATTGGAAGAAAAGCTTGCTTTCATGCATGAAACTAGACATGCTTATGGGAGGACTGCTTTGCTTTTAAGTGGGGGTGCTTCCCTTGGAGCTTTCCATGTTGGTGTAGTTAAAACACTTGTTGAACATAAACTTATGCCTAGGATAATTGCTGGTTCAAGTGTAGGATCCATTGTGTGTTCTATTGTTGCTACTAGGTCTTGGCCTGAGCTTCAAAGCTTTTTTGAGGATTCATTGCATTCGTTACAATTTTTTGATCAAATGGGTGGGATTTTTACTGTTGTGAAGAGGGTGACGACGTTTGGCGCAGTTCATGAAATCAGACAGTTGCAGATTATGTTGAGGCACCTAACAAGCAATCTTACATTCCAAGAAGCTTATGACATGACAGGTCGAGTTCTTGGCATTACAGTTTGCTCCCCTAGAAAGCACGAACCACCTAGATGTCTTAACTATTTGACTTCACCCCATGTTGTTATATGGAGTGCAGTCACAGCTTCTTGCGCTTTTCCTGGACTTTTTGAGGCTCAGGAATTGATGGCAAAGGATAGAAGTGGAGAGATTGTTCCTTATCATCCTCCATTTAATTTGGGTCCTGAAGAAGGTTCCTCTCAAGTGCGTCGATGGAGGGATGGTAGCTTGGAGATTGATCTACCTATGATGCAGTTGAAAGAGCTGTTTAATGTCAATCATTTTATAGTTAGTCAGGCCAATCCTCATATTGCTCCATTATTGAGATTGAAAGAATTTGTACGAGCTTATGGAGGTAACTTTGCTGCCAAGCTTGCTCATCTAGCAGAAATGGAGGTGAAACATCGATGTAATCAAGTACTGGAACTCGGTTTTCCATTAGGTGGACTTGCCAAGCTGTTTGCTCAAGACTGGGAGGGTGATGTAACAGTTGTTATGCCTGCTACTCTTGCTCAGTACTCAAAAATTATCCAGAACCCATCTTATGTGGAGCTTCAAAAGGCAGCTAACCAAGGGAGAAGATGCACTTGGGAGAAGCTTTCTGCCATTAAAGCTAATTGTGGAATTGAGCTTGCTCTTGATGAGTGTGTTGCAATGCTCAATCATATGAGAAGACTCAAAAGAAGTGCTGAGAGAGCTGCTGCTGCTTCTCATGGTCTTCCAAGTACTGTCAAGTTCAGTGCTTCAAAAAGAATTCCATCGTGGAATGTCATTGCACGAGAGAATTCTACAGGATCTCTTGAAGAAGACTTTCTTGCAGATGCTGCTTCCTCATTTTATCATGGGGTTAGTAGTTCGACTGGTAAAAATTTGAAGTCCCACCGCAACATGCATGATGCAAGTGACAGTGAATCCGAAAGTGCTGACTTGAATACTTGGACCAGATCTGGCGGTCCTTTGATGAGAACTACTTCGGCAAATTTGTTTATCGACTTTGTCCAAAACTTAGAAGTTGATACTGAACTAAATAGAGGAGTGGGAACTAATATTAGCCCTCGCAATTTTCAGTATCACAGTCCAAGACATACAACACCGGATAGATGCTCTGAGAACTCAGAATCCGATCAGAGAGAAAATGGCAACAGGGTTTCCATGAATGGATCTAGCATAATGGTAACTGAAGGTGATCTTTTGCAGCCCGAAAGAATCCTTAATGGAATTGTGTTTAATGTTGTCAAGAAAGAAGACTTGACACCTTCAAATAAGAGTCATGATTATGATAGTTATACTAACAATGAAGTTGCTGAGTGTGTCCAAATTGAATGTCCAGGGAAGGAGATGGATGATGCTGCTAGCTCAGCTTCCGAAAACGGAGATGGCGATTCCACAACAGCTAGGCCCCTAACTGAAACACCAGATTTTAATCCCACGGATAATTCCCGAAAAGATTTGGGTAAGGATCAGAGTATTGTTGACAGTGATAGCTCTAATGATAAAAATCCTTTACCTTAG 2559 0.4115 MDGISNEASVDPFSIGPSGILGRTIAFKVLFCKSMLHLRHQMFMGLLDVIRRFKRFWGPIISWLHPRNPQGILAMMTIVAFLLKRYSNVKVRAELAYRRKFWRNLMRTALTYEEWAHAAKMLDKETPKMNELDFYDVELVTNKLEELRQRRQEGSLRDIIFCMRADLVRNLGNMCNPELHKGRLHVPRHIKEYIDEVSTQLRMVCHSDSEELALEEKLAFMHETRHAYGRTALLLSGGASLGAFHVGVVKTLVEHKLMPRIIAGSSVGSIVCSIVATRSWPELQSFFEDSLHSLQFFDQMGGIFTVVKRVTTFGAVHEIRQLQIMLRHLTSNLTFQEAYDMTGRVLGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEEGSSQVRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFVRAYGGNFAAKLAHLAEMEVKHRCNQVLELGFPLGGLAKLFAQDWEGDVTVVMPATLAQYSKIIQNPSYVELQKAANQGRRCTWEKLSAIKANCGIELALDECVAMLNHMRRLKRSAERAAAASHGLPSTVKFSASKRIPSWNVIARENSTGSLEEDFLADAASSFYHGVSSSTGKNLKSHRNMHDASDSESESADLNTWTRSGGPLMRTTSANLFIDFVQNLEVDTELNRGVGTNISPRNFQYHSPRHTTPDRCSENSESDQRENGNRVSMNGSSIMVTEGDLLQPERILNGIVFNVVKKEDLTPSNKSHDYDSYTNNEVAECVQIECPGKEMDDAASSASENGDGDSTTARPLTETPDFNPTDNSRKDLGKDQSIVDSDSSNDKNPLP 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02308 852 MobiDBLite consensus disorder prediction 696 737 - -
Car04g02308 852 Pfam Patatin-like phospholipase 233 424 IPR002641 GO:0006629
Car04g02308 852 MobiDBLite consensus disorder prediction 712 726 - -
Car04g02308 852 MobiDBLite consensus disorder prediction 795 852 - -
Car04g02308 852 Pfam Domain of unknown function (DUF3336) 97 226 IPR021771 GO:0004806|GO:0006629
Car04g02308 852 Gene3D Cytosolic phospholipase A2 catalytic domain 220 447 - -
Car04g02308 852 MobiDBLite consensus disorder prediction 825 842 - -
Car04g02308 852 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
Car04g02308 852 CDD Pat_SDP1-like 163 570 - -
Car04g02308 852 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 713 - -
Car04g02308 852 MobiDBLite consensus disorder prediction 634 660 - -
Car04g02308 852 MobiDBLite consensus disorder prediction 804 824 - -
Car04g02308 852 SUPERFAMILY FabD/lysophospholipase-like 229 575 IPR016035 -
Car04g02308 852 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 713 - -
Car04g02308 852 MobiDBLite consensus disorder prediction 696 711 - -
Car04g02308 852 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02308 Car-Chr4 35006931 35011816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02308 4 802 Acyl Lipid Metabolism Gene Families AT5G04040 74.690 0.0 1236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02308 K14674 - gmx:100807526 1396.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02308 04 35006931 35011816 Car04g02308 04 35006931 35011816 ECH
Car03g02056 03 66813298 66817120 Car04g02308 04 35006931 35011816 PCT