Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02056 ATGGATCATATTAGTAATGAAGCTAGTGTTGACCGTTTTCCAATTGGTCCTTCAGACATTCTTGGTAGAACAATTGCTTTCAGGGTTCTTTTATGCAAATCTATGTCACACTTGAGGCGTCACATATTTCAAATCTTGTTAGAATTCTTGTATAGGTTTAAGGGTGTGTTGAAATTGAAATCCTTTTTATCATGGTTCCATCCAAGAAACCCTCAAGGGATATTAGCAATGATTACAATAGTTGCTATCTTGTTGAAACGTTACACAAATGTTAAAGTGAGGGCTGAAATGGCATATAGGAGAAAATTTTGGAGAAACATGATGAAAAGTGCTTTGACCTATGATGAATGGGCTCATGCAGCTAAGATGCTTGATAAAGAGACACCAAGGATGAATGAGTCAGATTTTTATGATGTAGAGTTGGTTAGGAACAAGCTTCAAGAGCTTCATCAACGTCGACACCAGGGATCGCTTAGAGATATAATGTTTTGTATGCGTGCCGATCTTGTTAGAAATCTAGGGAATATGTGTAACCCTGAACTACATAAGGGTAGGCTTCAAGTTCCTAAGTTAATCAAGGAGTATATTGATGAGGTGTCAACACAATTGAGAATGGTTTGTGATTCTGATACGGAGGAGTTATCGTTGGAAGAAAAGCTTGCTTTCATGCATGAAACTAGACATGCTTTTGGTAGAACAGCTTTGCTTTTAAGTGGTGGTGCTTCTCTTGGATCATTTCATGTTGGTGTAGTTAAAACATTGGTGGAACATAAACTCTTGCCTAGGATAGTTGCAGGTTCAAGTGTTGGATCTATTATGTGTGCTATTGTTGCCACTAGATCATGGCCTGAGCTTCAGCGTTTTTTCGAGGACTCCTTGCATTCCTTGCAGTTTTTCGATCAAATGGGTGGGATTTTTGCAGTTGTCAAGAGGGTCGCGATGCGCGGCGCTGTTCATGAGATCAGGCAGTTGCAAATGTTGTTGAGACATTTAACAAACAACCTTACATTTCAAGAAGCTTATGATATGACAGGTAGAGTTCTTGGGATTACTGTTTGCTCACCGAGGAAGCATGAACCTCCTAGATGTCTTAACTACTTGACATCGCCTCATGTGGTTATATGGAGTGCGGTAACCGCTTCTTGCGCCTTCCCTGGCCTTTTTGAAGCTCAAGAATTGATGGCAAAGAATAGAAGTGGAGATATTGTCCCTTATCATCCTCCTTTTAATCTCGGTCCCGAGGAAGGCTCCACGCCGTCGCGCCGATGGAGGGATGGTAGTTTAGAGATTGATTTGCCTATGATGCAGCTGAAAGAGCTTTTCAATGTCAATCATTTCATAGTCAGTCAGGCCAACCCTCACATCGCACCGTTGTTGAGATTGAAAGAATTTGTACGAACTTATGGAGGCAATTTTGCTGCCAAGCTTGCTCACCTTGTGGTGTTGGAGGTGAAACATAGATGTAATCAAGTGTTGGAACTTGGCTTTCCCTTAGGTGGACTTGCTAAACTGTTTGCTCAAGAATGGGAAGGTGATGTCACTATTGTTATGCCTGCTACCCTTGCTCAGTACTCAAAAATTATACAGAACCCTTCTTATGGAGAGCTTCAAAAGGCAGCCAACCAAGGGAGAAGATGTAGCTGGGAGAAGCTATCAGCCATAAAAGCAAATTGCGAAATTGAGCTTGCTCTTGATGAATGTGTGACAATTCTCAATCATATGAGAAGACTAAAACGAATTTCTGAGAGAACTTCTGCTTCTTCTGTTTCTCCTGGTTTGTCCAGTGCCGTCAAATTCAGTGCTTCAAGAAGAATACCTTCGTGGAATTGCATCGCCCGAGAGAATTCGACAGGTTCTCTTGAAGACCTTACTGATGTTGCTTCCTCGTTGCATCAAGGCGTCAGCGGTTCCAACATTGACTCAGAAAATGTTGATTTGATTTCGTGGACGAGATCGGGCGGTCCTTTGATGAGAACTGCATCGGCAAACATGTTTGTCGACTTTCTCCAAAACTTAGAGGTTGATACCGAACTAAATAGAGGCACAGCGGCGTATGCCAGCCCTCGTGATTTTAAGTATCATAGTTTCAGGCTCACAGGACCGGATAGGAACTCGGAATGCAATGAATCTGATCAGAAGGAAATTGGCAACAGGGTTGTGAATGGGTCTAGCATACTGATAAGTGAAGGGGACCTTTTGCAGCCTGAAAAGATTCATAATGGGATTGTTTTCAATGTTGTCAAGAAAGAAGCCTTAAAACCTTCAGATACGTGTCGTGATTTTGGAAATTATGACAAGGAAGTTGTCGAATGTGTCGAAATCGACTGTCCTGGAAAAGAGATGGATAATGCTAGCTCTGATTCTGATTATGTAGATGATGAATCCACACCAGCTAAGTCCCTAACTGAAATTCAAGATTTGAGCATGGAGCAAAACATTGTTAATAGTTAG 2451 0.4166 MDHISNEASVDRFPIGPSDILGRTIAFRVLLCKSMSHLRRHIFQILLEFLYRFKGVLKLKSFLSWFHPRNPQGILAMITIVAILLKRYTNVKVRAEMAYRRKFWRNMMKSALTYDEWAHAAKMLDKETPRMNESDFYDVELVRNKLQELHQRRHQGSLRDIMFCMRADLVRNLGNMCNPELHKGRLQVPKLIKEYIDEVSTQLRMVCDSDTEELSLEEKLAFMHETRHAFGRTALLLSGGASLGSFHVGVVKTLVEHKLLPRIVAGSSVGSIMCAIVATRSWPELQRFFEDSLHSLQFFDQMGGIFAVVKRVAMRGAVHEIRQLQMLLRHLTNNLTFQEAYDMTGRVLGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKNRSGDIVPYHPPFNLGPEEGSTPSRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFVRTYGGNFAAKLAHLVVLEVKHRCNQVLELGFPLGGLAKLFAQEWEGDVTIVMPATLAQYSKIIQNPSYGELQKAANQGRRCSWEKLSAIKANCEIELALDECVTILNHMRRLKRISERTSASSVSPGLSSAVKFSASRRIPSWNCIARENSTGSLEDLTDVASSLHQGVSGSNIDSENVDLISWTRSGGPLMRTASANMFVDFLQNLEVDTELNRGTAAYASPRDFKYHSFRLTGPDRNSECNESDQKEIGNRVVNGSSILISEGDLLQPEKIHNGIVFNVVKKEALKPSDTCRDFGNYDKEVVECVEIDCPGKEMDNASSDSDYVDDESTPAKSLTEIQDLSMEQNIVNS 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02056 816 CDD Pat_SDP1-like 165 572 - -
Car03g02056 816 Pfam Patatin-like phospholipase 235 427 IPR002641 GO:0006629
Car03g02056 816 MobiDBLite consensus disorder prediction 780 796 - -
Car03g02056 816 Gene3D Cytosolic phospholipase A2 catalytic domain 232 318 - -
Car03g02056 816 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 235 438 IPR002641 GO:0006629
Car03g02056 816 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 699 - -
Car03g02056 816 Gene3D Cytosolic phospholipase A2 catalytic domain 319 475 - -
Car03g02056 816 MobiDBLite consensus disorder prediction 798 816 - -
Car03g02056 816 Pfam Domain of unknown function (DUF3336) 97 228 IPR021771 GO:0004806|GO:0006629
Car03g02056 816 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 699 - -
Car03g02056 816 MobiDBLite consensus disorder prediction 780 816 - -
Car03g02056 816 SUPERFAMILY FabD/lysophospholipase-like 231 577 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02056 Car-Chr3 66813298 66817120 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02056 4 785 Acyl Lipid Metabolism Gene Families AT5G04040 73.034 0.0 1196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02056 K14674 - gmx:100816093 1353.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02056 03 66813298 66817120 Car03g02056 03 66813298 66817120 ECH
Car03g02056 03 66813298 66817120 Car04g02308 04 35006931 35011816 PCT