Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02284 ATGGGTGTGATTAGTAATGCAGATTCAAATGGATCTGTTCAGAATTGCAATAATGGTTTAGAGGAGAAGCTCGACGAACTTCGCAGGCTTCTCGGTAAGTCTAATGGCGATCCTTTGAGGATTGTTAGTGTTGGAGCTGGAGCTTGGGGGAGTGTTTTTACAGCCTTGTTACAAGACACTTATGGTCAATTTCGCGACAAAGTACAGATCAGGATATGGAGAAGGCCATTAAGGACAGTTGATAGAGCCACTGCTGAGCATCTGTTTGAAGTTATTAACTCTAGGGAGGACGTGTTGAGGAGGTTGATTCGGCGTTGCGCGTATTTGAAATATGTTGAGGCAAGGCTTGGTGATAGGACTCTATTTGCTGATGAGATTTTGAAAGATGGGTTTTGTTTGAATATGATTGATACACCAATTTGTCCTTTGAAGGTTGTTACAAATTTGCAGGAAGCTGTTTGGGATGCTGATATTGTTGTTAATGGATTGCCTTCGACCGAAACACGCGAGATTTTTGAAGAGATTAGTAAATATTGGAAGGAAAGAATTACAGTTCCTGTGATAATTTCTTTAGCTAAGGGTATAGAGGCTGCATTGGAGCCTGTTCCTCATATTATAACTCCCACAAAAATGATTAACCAAGCAACTGGAGTTCCAATGGAGAACATACTTTATCTTGGTGGTCCAAATATTGCATCAGAAATCTACAACAAGGAGTACGCCAATGCTCGAATCTGCGGTGCTGAGAAATGGAGGAAGCCTATTGCAAAGTTTCTGAGACAACCACATTTTATTGTCTGGGACAACGGTGACCTTGTCACCCATGAGGTCATGGGTGGTTTGAAAAATGTTTATGCAATTGGTGCTGGAATGGTAGCAGCCCTTACCAATGAGAGTGCTACAAGCAAATCTGTGTATTTTGCACACTGTACATCTGAGATGATATTTATTACTCACTTATTGGCTGAAGAACCCGAGAAACTTGCCGGACCGTTATTAGCCGATACTTATGTGACTTTGTTGAAAGGTCGTAATGCATGGTATGGACAGATGCTAGCTAAGGGTGAATTAAGCCCTGACATGGGTGACAGCATTAGAGGCAAAGGAATGATTCAGGGTGTGTCAGCAGTGGAAGCATTCTTTGAACTTTTGAGCCAATCAAGCCTTAATGTGTTGCACCCTGAAGTGAACAAGCCAGTTGCTCCTGTTGAGCTCTGCCCAATCTTGAAGACACTATATAAAATATTAATATCGAGGGAACAATCATCACAAGCTATTCTCCAAGCTCTGAGGGATGAAAATCTGAACGATCCCCGTGAACGTATTGAGATTGCACAAAGCCATGCTTTCTACAGGCCTTCACTTCTTGGACAACCTTGA 1380 0.421 MGVISNADSNGSVQNCNNGLEEKLDELRRLLGKSNGDPLRIVSVGAGAWGSVFTALLQDTYGQFRDKVQIRIWRRPLRTVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTPICPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPVIISLAKGIEAALEPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPIAKFLRQPHFIVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGELSPDMGDSIRGKGMIQGVSAVEAFFELLSQSSLNVLHPEVNKPVAPVELCPILKTLYKILISREQSSQAILQALRDENLNDPRERIEIAQSHAFYRPSLLGQP 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02284 459 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 271 426 IPR008927 -
Car04g02284 459 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 271 425 IPR006109 GO:0004367|GO:0005975
Car04g02284 459 Coils Coil 17 37 - -
Car04g02284 459 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 9 459 - -
Car04g02284 459 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 143 245 IPR011128 GO:0016616|GO:0046168|GO:0051287
Car04g02284 459 Gene3D - 21 102 - -
Car04g02284 459 Gene3D - 271 431 IPR013328 GO:0016491
Car04g02284 459 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 43 60 IPR006168 GO:0004367|GO:0006072|GO:0009331
Car04g02284 459 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 264 288 IPR006168 GO:0004367|GO:0006072|GO:0009331
Car04g02284 459 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 271 IPR036291 -
Car04g02284 459 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 9 459 - -
Car04g02284 459 Gene3D - 133 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02284 Car-Chr4 33899917 33904497 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02284 9 459 Acyl Lipid Metabolism Gene Families AT2G41540 88.470 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02284 K00006 - gmx:100794592 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02078 03 67038895 67043070 Car04g02284 04 33899917 33904497 PCT