Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02078 ATGGTAGGAAGCATTATGGGAATGATGAGTAATAACACATGCTCAAATGGGTCATCTCAGAATTGTAATAATAATGGTTTAGAGGATAAGCTTGATGAGTTTAGGAGACTAATTGGGAAGAGTAATGGTGACCCTTTGAGAATTGTGAGTGTTGGAGCTGGTGCTTGGGGAAGTGTTTTTGCATCCCTTTTACAAGATAGTTATGGCCAATTTAGAGACAAAGTACAAATAAGGATATGGAGAAGATCAGGTAGAGCAGTTGATAGATCAACAGCTGAACATCTCTTTGAAGTTATCAACTCAAGAGAAGATGTTTTGAGGAGGTTGATAAGACGTTGTGCTTATCTTAAATATGTTGAGGCTAGGCTTGGTGATAGGACACTTTTTGCTGATGAGATTCTTAAAGATGGATTTTGTTTGAACATGATTGATACTCCTGTTTCTCCTTTGAAAGTTGTCACTAATTTGCAAGAAGCTGTTTGGGATGCTGATATTGTTGTTAATGGTTTGCCTTCAACTGAGACTCGTGAGATTTTTGAAGAGATTAGTAAATATTGGAAGGAGAGGATCACTGTTCCTATAATCATTTCTTTGTCTAAAGGTATTGAGGCTGCATTGGAGCCTGTTCCTCATATTGTTACTCCCACAAAAATGATTCATCAAGCAACTGGAGTGCCTGTGGAAAACATACTTTATCTTGGTGGTCCTAACATTGCCTCAGAAATCCACAACAAGGAGTATGCCAATGCTAGAATATGTGGAGCTGAGAAATGGAGGAAACATTTAGCAAAGTTTCTCAGACAACCACATTTTATTGTATGGGACAATAGTGACCTTGTCACCCATGAGGTTATGGGTGGCTTGAAAAATGTCTATGCAATTGGAGCTGGAATGGTAGCATCCCTTACCAATGAGAGTGCTACTAGCAAATCTGTGTACTTTGCACACTGTACATCAGAGATGATATTCATCACTCACTTGTTAACTGAAGAGCCTGAGAAACTTGCTGGACCATTACTAGCTGACACTTACGTCACCTTGTTAAAAGGTCGTAACGCGTGGTACGGTCAGATGTTAGCTAAGGGTGAGCTAAGCCCTGACATGGGTGATAGCATTAGTGGCAAAGGAATGATTCAGGGAGTATCTGCAGTGGAGGCATTCTTTGAACTTTTGAGCCAATCAAGCCTGAATGTGTTGCATCCTGAAGAAAAAAAACCTGTTGCTCCTGTTGAGCTCTGCCCTATCTTGAAGACACTCTACAAAATATTGATATTAAGGGAACAATCAACACAAGCTATTCTAAAAGCTCTGAGGGATGAAAATCTGAACGATCCGCGAGAACGTATCGCAATTGCACAAAGCCATGCTTTCTACAGGCCTTCACTTCTTGGACAACAGTGA 1401 0.4026 MVGSIMGMMSNNTCSNGSSQNCNNNGLEDKLDEFRRLIGKSNGDPLRIVSVGAGAWGSVFASLLQDSYGQFRDKVQIRIWRRSGRAVDRSTAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTPVSPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPIIISLSKGIEAALEPVPHIVTPTKMIHQATGVPVENILYLGGPNIASEIHNKEYANARICGAEKWRKHLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVASLTNESATSKSVYFAHCTSEMIFITHLLTEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGELSPDMGDSISGKGMIQGVSAVEAFFELLSQSSLNVLHPEEKKPVAPVELCPILKTLYKILILREQSTQAILKALRDENLNDPRERIAIAQSHAFYRPSLLGQQ 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02078 466 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 278 432 IPR006109 GO:0004367|GO:0005975
Car03g02078 466 Gene3D - 278 438 IPR013328 GO:0016491
Car03g02078 466 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 278 IPR036291 -
Car03g02078 466 Gene3D - 28 109 - -
Car03g02078 466 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 1 465 - -
Car03g02078 466 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 278 428 IPR008927 -
Car03g02078 466 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 50 67 IPR006168 GO:0004367|GO:0006072|GO:0009331
Car03g02078 466 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 271 295 IPR006168 GO:0004367|GO:0006072|GO:0009331
Car03g02078 466 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 149 252 IPR011128 GO:0016616|GO:0046168|GO:0051287
Car03g02078 466 Gene3D - 135 274 - -
Car03g02078 466 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 1 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02078 Car-Chr3 67038895 67043070 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02078 1 465 Acyl Lipid Metabolism Gene Families AT2G41540 87.312 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02078 K00006 - gmx:100781512 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02078 03 67038895 67043070 Car04g02284 04 33899917 33904497 PCT