Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02253 ATGAACTGCATTGTTGATGCCTCTTTCTCCACTCATACCAATAAGGTTGGAGTTGAAATTTGTATTAGGAATGAACATGGAGAGTTTGTGGTGGCTAAAGCAGACTGTTTCACACCTCAATGCGAAGTTCACATAGGCgagacagagagaaagaaagaagagagagGGGCCACACACAACACAACAAAGCCACACCAAATAATTCACTTTCCTTTCAAACTTTCTCTCTCTCATTCTCATCATCACCGTTCAGATCTCAGTGGATTTGGCATTTGCAGCAGGTGTTTGTCGAAAAAGGAGCATTTAGCTATGTCTAGCACTGCAAAAGTTTTGGATCCTGCATTCCAAGGAGTGGGTCAGAGAGTAGGAACTGAAATATGGAGGATTGAGAATTTTCAGCCGGTTCCATTGCCCAAATCTGAATATGGGAAGTTCTACACAGGAGATTCATATATCATCTTGCAGACAACACAAGGCAAAGGAGGTACCTATTTTTATGATTTACACTTCTGGATTGGAAAGGATACGAGTCAGGATGAGGCCGGAACAGCAGCGATTAAAGCTGTTGAACTTGATGCAGCTCTTGGAGGACGAGCAGTTCAGCACAGAGAGATTCAAGGACATGAATCTGACAAATTTTTGTCATATTTTAAGCCATGTATTATACCATTAGAGGGGGGTATTGCATCAGGATTTAGAAAACCTGAAGAGGAGGAGTTTGAAACACATTTGTATGTATGCAAAGGGAAAAGAGTAGTTAGATTGAAACAGGTCCCGTTTGCAAGGTCTTCATTGAACCATGATGATGTGTTCATTCTTGACACCCAGAATAAGATTTATCAATTCAACGGTGCAAATTCCAATATTCAGGAAAGAGCCAAGGCTTTGGAAGTTGTACAGTTTCTGAAAGAAAAATATCATGAAGGGAAATGTGATGTTGCAATTGTTGATGATGGAAAGTTAGACACTGAGTCAGATTCAGGAGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTTCAAAAAAGGTAATCAGTGAGGATGATATCATCCCAGAGGAAATTCCTGCTCAGCTGTATAGTATCATTGATGGTGAGGTCAAGTCTGAGGAAGGTGAACTATCTAAGTCACTGCTGGAGAACAACAAATGCTATTTACTAGACTGTGGCACTGAGGTATTTATCTGGTTTGGCCGGGTAACACCAGTGGAAGAACGAAAAGCAGCTTGCCAAGCAGCTGATGAGTTTGTTTCAAGCCAAAATAGGCCAAAATCTACAAGGATAACAAGGATTATTCAAGGTTATGAGACACGTTCATTTAAGTCAAACTTTGATTCTTGGCCATCAGGATCTGCTGGTACTTCTGCTGAGGAAGGAAAAGGAAAAGTTGCAGCATTGCTTAAGCAAAAAGGGATGGGTGTCAAAGGAATGACAAAAAGTACCCCTGCAAATGATGAAATTCCACCATTGCTTGAAATAGGAGGAAAGATGGAGGTATGGCGAATAAATGGAAGTGATAAGACCTCATTGCCAAATGAGGAGATTGGTAAATTTCATATTGGAGATTGTTACATTGTACTGTACACATACCATTCTGGTGAGAGGAAAGAAGATTACTTCTTGTGCTGCTGGTTTGGCAAAGACAGCGTTGAGGAGGACCAAACAATGGCTACTCGATTGGCTAATACGATGTCCAATTCTTTGAAGGGCAGACCTGTTCAGGGTCGCATATTCGAAGGTAAAGAGTCACCACAATTTGTTGCTCTTTTCCAACCTATGATAGTCCTTAAGGGAGGTTTGAGCTCTGGATACAAAAAACTTCTAGCAGACAAAGGTTTATCAGATGAGACATACACCGCAGAATCTATTGCGCTTATTCGAATTTCTGGAACCTCCACCCATAGCAATAAGGCAGTGCAAGTTGATTCAGTACCATCGTCATTGAATTCTACTGAATGTTTTATCCTGCAATTTGGCTCTACAAATTTCGCTTGGCATGGGAATCATTGTTCGGTTGCACAGCAGCAGCTAGCAGCAAAGATTGCAGAATATCTAAGGCCAGGAGTTCCTTTAAAGCATGTTAAAGAAGGTACAGAAAGCTCATCTTTCTGGATGGCAATAGGAGGAAAACAAAGTTACACCAGCAAGAAAGTTACTAATGAGGTTGTTAGAGATCCACACTTGTTCACGTTCTCATTTTATAAAGAGGAGGTTTACAACTTCTCCCAAGATGATTTATTAACAGAGGATATCCTCTTACTCGACACACATGCAGAAGTGTTTGTTTGGATTGGTCAGTGTGTTGACCCAACAGAAAAGCAAAATGCTTTTGAAATTGGTCAGAAATACGTAGATATGGCTGCATCTCTGGAGGGGTTATCTCCATGTGTACCATTATATAAAGTAACAGAAGGGAATGAACCTTGCTTTTTCACAACATACTTTTCGTGGGATCATGCAAAAGCTACGGTTCATGGAAACTCATTCCAGAAAAAGGCGTCGCTACTCTTTGGGATTGGCCATGCTATGGAGGAAAAATCAAATGGGTCAAGTGGAGGGGGACCAAGACAAAGGGCAGAAGCTTTGGCTGCTTTAACTTCTGCTTTTAGCTCATCATCTGAGAAAGCACAGAGTATGTCACAGGAGAGATTGAATGGATTGAACCAAGGAGGACCAAGACAAAGAGCAGAAGCTTTAGCAGCTTTAAACTCTGCATTTAGTTCTTCATCAATGACAAAGAAAGTTACTCCTAGGCCTTCTGCAAAAGGTCAAGGATCACAAAGAGCAGCAGCTGTAGCTGCTCTTTCGTCAGTTCTTACTGCTGAGAAGAAGAAACATTCACCCGATGACTCTCCTGTGGCTAGTCACAGTCCTGTCCTGGAGAGTAGCATTTCTGAAGCTAAAAGTGGAACTGAATATTCTGAAGTTGATGAAGCTGCAGAAGCCAAGGAAATGGAAGAAGCTTCCCCTGAAGCTGGAAGTAATGGGGATCTGGAATCTAAACAAGAAAATGTGGAGGATGGAAATAATAGTAAAAAAACATTCAGTTATGATCAATTAAAGAACACATCTCGCAAAAATATCTCCGGAATTGATCTTAATCGGAGAGAGGCCTATCTGTCAGACGAAGAATTCAAAACTGTATTTGGAATGGTAAAAGAAGAATTTTATAAATTGCCGAGATGGAAGCAAGACTTGCTGAAAAAGAAATTTGAATTGTTCTAG 3225 0.4053 MNCIVDASFSTHTNKVGVEICIRNEHGEFVVAKADCFTPQCEVHIGETERKKEERGATHNTTKPHQIIHFPFKLSLSHSHHHRSDLSGFGICSRCLSKKEHLAMSSTAKVLDPAFQGVGQRVGTEIWRIENFQPVPLPKSEYGKFYTGDSYIILQTTQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGIASGFRKPEEEEFETHLYVCKGKRVVRLKQVPFARSSLNHDDVFILDTQNKIYQFNGANSNIQERAKALEVVQFLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPISKKVISEDDIIPEEIPAQLYSIIDGEVKSEEGELSKSLLENNKCYLLDCGTEVFIWFGRVTPVEERKAACQAADEFVSSQNRPKSTRITRIIQGYETRSFKSNFDSWPSGSAGTSAEEGKGKVAALLKQKGMGVKGMTKSTPANDEIPPLLEIGGKMEVWRINGSDKTSLPNEEIGKFHIGDCYIVLYTYHSGERKEDYFLCCWFGKDSVEEDQTMATRLANTMSNSLKGRPVQGRIFEGKESPQFVALFQPMIVLKGGLSSGYKKLLADKGLSDETYTAESIALIRISGTSTHSNKAVQVDSVPSSLNSTECFILQFGSTNFAWHGNHCSVAQQQLAAKIAEYLRPGVPLKHVKEGTESSSFWMAIGGKQSYTSKKVTNEVVRDPHLFTFSFYKEEVYNFSQDDLLTEDILLLDTHAEVFVWIGQCVDPTEKQNAFEIGQKYVDMAASLEGLSPCVPLYKVTEGNEPCFFTTYFSWDHAKATVHGNSFQKKASLLFGIGHAMEEKSNGSSGGGPRQRAEALAALTSAFSSSSEKAQSMSQERLNGLNQGGPRQRAEALAALNSAFSSSSMTKKVTPRPSAKGQGSQRAAAVAALSSVLTAEKKKHSPDDSPVASHSPVLESSISEAKSGTEYSEVDEAAEAKEMEEASPEAGSNGDLESKQENVEDGNNSKKTFSYDQLKNTSRKNISGIDLNRREAYLSDEEFKTVFGMVKEEFYKLPRWKQDLLKKKFELF 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02253 1074 MobiDBLite consensus disorder prediction 872 888 - -
Car04g02253 1074 CDD gelsolin_S6_like 725 818 - -
Car04g02253 1074 SUPERFAMILY Actin depolymerizing proteins 112 250 - -
Car04g02253 1074 MobiDBLite consensus disorder prediction 907 923 - -
Car04g02253 1074 Gene3D Severin 492 620 IPR029006 -
Car04g02253 1074 Pfam Villin headpiece domain 1039 1074 IPR003128 GO:0003779|GO:0007010
Car04g02253 1074 MobiDBLite consensus disorder prediction 971 990 - -
Car04g02253 1074 Pfam Gelsolin repeat 735 809 IPR007123 -
Car04g02253 1074 Pfam Gelsolin repeat 132 214 IPR007123 -
Car04g02253 1074 Pfam Gelsolin repeat 369 440 IPR007123 -
Car04g02253 1074 Pfam Gelsolin repeat 253 320 IPR007123 -
Car04g02253 1074 Pfam Gelsolin repeat 515 586 IPR007123 -
Car04g02253 1074 SUPERFAMILY Actin depolymerizing proteins 237 344 - -
Car04g02253 1074 ProSiteProfiles Headpiece (HP) domain profile. 1009 1074 IPR003128 GO:0003779|GO:0007010
Car04g02253 1074 SUPERFAMILY VHP, Villin headpiece domain 1009 1074 IPR036886 GO:0003779|GO:0007010
Car04g02253 1074 MobiDBLite consensus disorder prediction 956 970 - -
Car04g02253 1074 Gene3D Severin 717 833 IPR029006 -
Car04g02253 1074 SUPERFAMILY Actin depolymerizing proteins 613 718 - -
Car04g02253 1074 CDD gelsolin_S1_like 115 227 - -
Car04g02253 1074 CDD gelsolin_S3_like 370 446 - -
Car04g02253 1074 Gene3D Severin 236 349 IPR029006 -
Car04g02253 1074 Gene3D Severin 355 456 IPR029006 -
Car04g02253 1074 PRINTS Gelsolin family signature 696 715 IPR007122 GO:0051015
Car04g02253 1074 PRINTS Gelsolin family signature 743 765 IPR007122 GO:0051015
Car04g02253 1074 PRINTS Gelsolin family signature 573 593 IPR007122 GO:0051015
Car04g02253 1074 PRINTS Gelsolin family signature 636 656 IPR007122 GO:0051015
Car04g02253 1074 PRINTS Gelsolin family signature 772 791 IPR007122 GO:0051015
Car04g02253 1074 PRINTS Gelsolin family signature 426 447 IPR007122 GO:0051015
Car04g02253 1074 PRINTS Gelsolin family signature 514 530 IPR007122 GO:0051015
Car04g02253 1074 PRINTS Gelsolin family signature 540 558 IPR007122 GO:0051015
Car04g02253 1074 CDD gelsolin_S2_like 241 335 - -
Car04g02253 1074 PANTHER VILLIN 104 1074 IPR007122 GO:0051015
Car04g02253 1074 SMART VHP_1 1039 1074 IPR003128 GO:0003779|GO:0007010
Car04g02253 1074 MobiDBLite consensus disorder prediction 907 1019 - -
Car04g02253 1074 CDD gelsolin_S5_like 622 712 - -
Car04g02253 1074 PANTHER VILLIN-3-LIKE ISOFORM X1 104 1074 - -
Car04g02253 1074 Gene3D Severin 621 716 IPR029006 -
Car04g02253 1074 SMART VILL_6 240 337 IPR007122 GO:0051015
Car04g02253 1074 SMART VILL_6 122 220 IPR007122 GO:0051015
Car04g02253 1074 SMART VILL_6 621 710 IPR007122 GO:0051015
Car04g02253 1074 SMART VILL_6 495 593 IPR007122 GO:0051015
Car04g02253 1074 SMART VILL_6 723 817 IPR007122 GO:0051015
Car04g02253 1074 SMART VILL_6 355 447 IPR007122 GO:0051015
Car04g02253 1074 SUPERFAMILY Actin depolymerizing proteins 699 816 - -
Car04g02253 1074 Gene3D Severin 108 235 IPR029006 -
Car04g02253 1074 SUPERFAMILY Actin depolymerizing proteins 326 450 - -
Car04g02253 1074 SUPERFAMILY Actin depolymerizing proteins 489 632 - -
Car04g02253 1074 MobiDBLite consensus disorder prediction 872 895 - -
Car04g02253 1074 Gene3D Villin headpiece domain 996 1074 IPR036886 GO:0003779|GO:0007010
Car04g02253 1074 CDD gelsolin_S4_like 494 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02253 Car-Chr4 32695840 32721154 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02253 - - gmx:100788765 1602.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02098 03 67235456 67251063 Car04g02253 04 32695840 32721154 PCT