Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02098 ATGTCTAGTGCCACAAAAGTTTTGGAACCAGCATTCCAGGGAGTAGGCCAAAAAGTAGGGAGTGAAATATGGAGGATTGAAAATTTTCAGCCAGTTCCATTACCAAAATCTGATTATGGGAAATTCTACATGGGAGATTCTTACATCATCTTGCAGACAACACAAGGCAAAGGAGGCAATTACTTGTATGATATTCACTTCTGGATTGGAAAAGATACAAGTCAGGATGAGGCTGGAACTGCAGCCATTAAAACTGTTGAACTTGATGCATCCCTCGGAGGACGTGCAGTGCAGCACAGGGAAATCCAAGGGCATGAATCTGACAAATTTTTGTCATACTTTAAGCCATGTATTATACCATTAGAAGGGGGTGTTGCATCTGGTTTCAAAAAACCTGAAGAAGAGGAGTTTGAGACCCGATTGTATGCATGCAAAGGAAAACGAGTTGTCAGAATAAAACAGATCCCTTTTGCACGGTCTTCACTGAATCATGATGATGTGTTTATCTTAGACACTCAGGATAAGATATATCAATTCAATGGTGCAAATTCAAATATTCAGGAAAGAGCCAAAGCTTTGGAAATTATTCAGTTGTTGAAGGAAAAGTATCATGAAGGGAAATGCAATGTTGCCATTGTTGATGATGGAAAGTTGGATACTGAGTCAGACTCAGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTAATCAGTGAGGATGATATAGTTCCAGAGACTATTCCTGCTCAACTTTATAGTATTGGTGATGGTGAAGTCAAGTCAGTGGAAAGTGAACTTTCTAAGTCACTGTTGGAGAACAACAAATGCTATTTATTGGACTGTGGTGCTGAGGTATTTGTGTGGGTTGGAAGGGTAACACAAGTTGATGAAAGAAAAGCAGCATGTCAAGCTGCTGAGGACTTTGTTGCAAGTCAAAAAAGGCCGAAATCTACAAGGGTAACAAGGGTTATTCAAGGTTATGAGACACATTCATTTAAATCCAACTTTGATTCTTGGCCATCAGGATCATCTGCTACTACTGCTGGTGCTGAGGAAGGAAGAGGAAAAGTTGCAGCTTTACTGAAGCAACAAGGTATGGGTGTCAAGGGAGCGACAAAAAGTGCTCCAGTTAATGAGGAAATTCCACCTTTGCTTGAAGGAGGAGGAAAATTGGAGGTATGGCTAATCAATGGAAGTGCTAAGACTCCATTACCTAAGGAGGATGTTGGTAAATTTTATAGTGGAGATTGTTACATAGTGCTGTACACTTATCACTCTGGTGAGAGGAAGGATGACTACTTCTTGTGCTCCTGGTTTGGAAAAGACAGCATTGAGGAGGACCAAAAGATGGCTACTCGGTTGGCTACTACAATGTCCAACTCACTAAAGGGTAGACCTGTTCAGGGTCGCATATTTGATGGTAAAGAGGCACCACAGTTTGTTGCTCTTTTCCAACCTATGGTGACCCTCAAGGGTGGCTTGAGCTCTGGTTACAAAAAATTAATTGCAGAAAAAGGTTTGCCAGATGAAACATACACAGCAGAGAGTATTGCTCTTATTCGGATTTCTGGAACATCCGTTCATAATAATAAAACAATGCAAGTTGATGCAGTAGCGACATCATTGAATTCTACCGAGTGTTTTCTTCTGCAATCTGGCTCAACGGTTTTTACTTGGCATGGAAATCAATCTTCCATTGAGCAGCAGCAGCTTGCAGCAAAAGTTGCTGAGTTTTTAAGGCCAGGAGTTGCTTTAAAGCATGCTAAAGAAGGAACAGAAACCTCAGCTTTCTGGTTTGCTGTTGGAGGAAAACAAAGTGTCACTAGCAAAAAAGTCACTAATGACATCGTCAGAGACCCACATTTGTTCACTTTATCATTTACTAAAGCCGGAAAGCTACAGGAAGAGGAGCTTTATAACTTTTCACAGGATGATCTTTTAACAGAGGATATCCTCATACTTGATACGCATGCAGAAGTGTTTGTTTGGATTGGTCAATGTGTGGACCCAAAAGAAAAGCAAAATGCTTTTGAAATTGCCCAGAAATACATAGATAAGGCTGCATCTCTTGAGGGACTATCTCCTCATGTACCACTATATAAAGTAACAGAAGGGAATGAACCTTGCTTTTTCACAACATACTTTTCTTGGGATCATGCAAAAGCTACGGTTCAAGGGAACTCATTCCAGAAAAAGTTGGCATTACTCTTTGGAATTGGTCATTCTGTAGAGGAAAAATCTAATGGGCCAAGTCAAGGAGGACCACGACAACGAGCAGAAGCTTTGGCTGCTTTAAATAATGCATTCAATTCATCTCCTGAGACACCCACCAGTCCGGATAAATTTAATAACTTAAATCAAGGAGGACCAAGGCAAAGGGCAGAAGCTTTAGCTGCCTTAAACTCTGCATTTAGTTCATCATCGTCCGGAACTAAACCTGTTACTCCTAGGTCATCTGCAAGAGGTCAAGGATCTCAAAGAGCAGCAGCAGTAGCTGCTCTTTCCAATGTTCTCACGGCTGAAAAGAAGAAACATTCACCTGAAGGTTCTCCTGTGGCAAGCAGCAGTCCAGTTGTTGAAAGAAGCACTTTTGATGCTAAAAGTGAAACTGCCCCTTCTGAAACTGAAGGTCTTGAGGAAGTTACAGAAACCAAGGAGACGGTGGAGCCTGCTCCTGAGACTGGTAGCAATGGAAATTCAGAACCGAAACAAGAAAATGTAGAGGATGGAAATGATAATCAAAATAATCAAAGTGTCTTCACTTATGAGAAATTAAAGGCTAAATCTGGGAGTCATCTGTCTGGAATAGACCTTAAACGGAGAGAGACCTATCTGTCAGACACAGAGTTTGAAACCGTATTTGCAATGACAAAAGAAGCATTCTCGAAGTTGCCAAGATGGAAGCAAGACATGCTGAAAAGAAAAGTTGATTTGTTCTAA 2955 0.4108 MSSATKVLEPAFQGVGQKVGSEIWRIENFQPVPLPKSDYGKFYMGDSYIILQTTQGKGGNYLYDIHFWIGKDTSQDEAGTAAIKTVELDASLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEEFETRLYACKGKRVVRIKQIPFARSSLNHDDVFILDTQDKIYQFNGANSNIQERAKALEIIQLLKEKYHEGKCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIVPETIPAQLYSIGDGEVKSVESELSKSLLENNKCYLLDCGAEVFVWVGRVTQVDERKAACQAAEDFVASQKRPKSTRVTRVIQGYETHSFKSNFDSWPSGSSATTAGAEEGRGKVAALLKQQGMGVKGATKSAPVNEEIPPLLEGGGKLEVWLINGSAKTPLPKEDVGKFYSGDCYIVLYTYHSGERKDDYFLCSWFGKDSIEEDQKMATRLATTMSNSLKGRPVQGRIFDGKEAPQFVALFQPMVTLKGGLSSGYKKLIAEKGLPDETYTAESIALIRISGTSVHNNKTMQVDAVATSLNSTECFLLQSGSTVFTWHGNQSSIEQQQLAAKVAEFLRPGVALKHAKEGTETSAFWFAVGGKQSVTSKKVTNDIVRDPHLFTLSFTKAGKLQEEELYNFSQDDLLTEDILILDTHAEVFVWIGQCVDPKEKQNAFEIAQKYIDKAASLEGLSPHVPLYKVTEGNEPCFFTTYFSWDHAKATVQGNSFQKKLALLFGIGHSVEEKSNGPSQGGPRQRAEALAALNNAFNSSPETPTSPDKFNNLNQGGPRQRAEALAALNSAFSSSSSGTKPVTPRSSARGQGSQRAAAVAALSNVLTAEKKKHSPEGSPVASSSPVVERSTFDAKSETAPSETEGLEEVTETKETVEPAPETGSNGNSEPKQENVEDGNDNQNNQSVFTYEKLKAKSGSHLSGIDLKRRETYLSDTEFETVFAMTKEAFSKLPRWKQDMLKRKVDLF 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02098 984 SUPERFAMILY Actin depolymerizing proteins 512 614 - -
Car03g02098 984 MobiDBLite consensus disorder prediction 804 837 - -
Car03g02098 984 ProSiteProfiles Headpiece (HP) domain profile. 919 984 IPR003128 GO:0003779|GO:0007010
Car03g02098 984 SUPERFAMILY Actin depolymerizing proteins 385 530 - -
Car03g02098 984 CDD gelsolin_S2_like 139 232 - -
Car03g02098 984 Pfam Villin headpiece domain 949 984 IPR003128 GO:0003779|GO:0007010
Car03g02098 984 Gene3D Severin 6 131 IPR029006 -
Car03g02098 984 PANTHER VILLIN-3-LIKE ISOFORM X1 1 984 - -
Car03g02098 984 CDD gelsolin_S5_like 521 611 - -
Car03g02098 984 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Car03g02098 984 MobiDBLite consensus disorder prediction 894 928 - -
Car03g02098 984 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Car03g02098 984 Gene3D Severin 520 614 IPR029006 -
Car03g02098 984 SMART VILL_6 251 344 IPR007122 GO:0051015
Car03g02098 984 SMART VILL_6 394 492 IPR007122 GO:0051015
Car03g02098 984 SMART VILL_6 520 609 IPR007122 GO:0051015
Car03g02098 984 SMART VILL_6 19 117 IPR007122 GO:0051015
Car03g02098 984 SMART VILL_6 137 234 IPR007122 GO:0051015
Car03g02098 984 SMART VILL_6 626 722 IPR007122 GO:0051015
Car03g02098 984 Gene3D Severin 391 519 IPR029006 -
Car03g02098 984 CDD gelsolin_S4_like 388 489 - -
Car03g02098 984 CDD gelsolin_S3_like 254 343 - -
Car03g02098 984 Gene3D Severin 252 355 IPR029006 -
Car03g02098 984 MobiDBLite consensus disorder prediction 877 892 - -
Car03g02098 984 SUPERFAMILY VHP, Villin headpiece domain 918 984 IPR036886 GO:0003779|GO:0007010
Car03g02098 984 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Car03g02098 984 PRINTS Gelsolin family signature 413 429 IPR007122 GO:0051015
Car03g02098 984 PRINTS Gelsolin family signature 439 457 IPR007122 GO:0051015
Car03g02098 984 PRINTS Gelsolin family signature 472 492 IPR007122 GO:0051015
Car03g02098 984 PRINTS Gelsolin family signature 535 555 IPR007122 GO:0051015
Car03g02098 984 PRINTS Gelsolin family signature 595 614 IPR007122 GO:0051015
Car03g02098 984 PRINTS Gelsolin family signature 648 670 IPR007122 GO:0051015
Car03g02098 984 PRINTS Gelsolin family signature 677 696 IPR007122 GO:0051015
Car03g02098 984 MobiDBLite consensus disorder prediction 774 928 - -
Car03g02098 984 Gene3D Villin headpiece domain 906 984 IPR036886 GO:0003779|GO:0007010
Car03g02098 984 MobiDBLite consensus disorder prediction 774 795 - -
Car03g02098 984 CDD gelsolin_S1_like 12 124 - -
Car03g02098 984 MobiDBLite consensus disorder prediction 854 875 - -
Car03g02098 984 CDD gelsolin_S6_like 624 723 - -
Car03g02098 984 PANTHER VILLIN 1 984 IPR007122 GO:0051015
Car03g02098 984 SMART VHP_1 949 984 IPR003128 GO:0003779|GO:0007010
Car03g02098 984 Pfam Gelsolin repeat 538 585 IPR007123 -
Car03g02098 984 Pfam Gelsolin repeat 151 217 IPR007123 -
Car03g02098 984 Pfam Gelsolin repeat 645 716 IPR007123 -
Car03g02098 984 Pfam Gelsolin repeat 29 111 IPR007123 -
Car03g02098 984 Pfam Gelsolin repeat 267 337 IPR007123 -
Car03g02098 984 Pfam Gelsolin repeat 407 485 IPR007123 -
Car03g02098 984 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Car03g02098 984 Gene3D Severin 132 242 IPR029006 -
Car03g02098 984 Gene3D Severin 618 739 IPR029006 -
Car03g02098 984 SUPERFAMILY Actin depolymerizing proteins 616 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02098 Car-Chr3 67235456 67251063 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02098 - - gmx:100787208 1644.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02098 03 67235456 67251063 Car04g02253 04 32695840 32721154 PCT