Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02238 ATGCTAAGGACAACATCAGTAGCTTCAGAACAAACTTCGTGTTGGATAAGGATTCCTCCTTCATGGCTGCCACATCGGAATCACTCTAATTCGCGCATAACCTTTAGTAACCATCATCATCATCATAAGTCCCTAGTGGTGAAGTGTTGCAATATGACGGTGACACCTAAGATATTGATTAACGATGGGAATCTGGTGGTTCATGGGAAGACTATACTGAGTGAAGTTCCAGACAACATTGTAGTAACTCCAGGAAATGGAAAGGGAATTGTCACTGGTGCTTTTGTTGGTGCTACTGCTTCCAACACCAAAAGTCTCCATGTGTTTCCCATTGGTGTCTTACAGGATCTCCGATACTTGTGTTGTTTCCGGTTCAAGTTATGGTGGATGACTCATAGAGTTGGAACTTATGGGAGGGATGTTCCATTGGAGACCCAATTCATGCTTATAGAGATTAAAGATAGTAAAAATCAACAGGAAAATTCTCCAGTTATCTACACTGTCTTGCTTCCTCTCTTGGAAGGCCAGTTCCGCGCTGTCCTACAAGGAAATGACAAAAATGAGATAGAGATTTGTCTTGAGAGTGGAGATCCTGCTGTTAAGACCAATCAAGGCCTTCACATGGTCTACATGCATGCTGGAACCAACCCGTTCGAAGTCATCAACCAAGCTGTTAAGGCTGTTGAAAAACATATGCAAACTTTCCTTCATCGTGAGAAGAAAAGATTGCCGTCTTTTCTTGACTGGTTTGGCTGGTGCACATGGGATGCTTTCTATACTGATGTCACAGCTGTAGGTATTGAAGAAGGCTTAAAAAGCCTATCAGAGGGAGGTGCATCTCCGCGGTTCCTCATCGTCGATGATGGTTGGCAACAGATTGAGAGTAAACCAAAAGATGCAGATTCTGTTGTACAAGAAGGAGCCCAGTTTGCTACTAGGTTGACTGGTATTAAAGAGAACACTAAATTTCAAAAGAATGGAGAGAGTAATGGCCTCAAGCATGTTGTGAATCAAACAAAGCAAAATTACAATGTGAAGTATTTTTATGTTTGGCATGCTCTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGCAATTGGAATGGAACATTTTGACACTTCCTTGGCTTATCCAAAACACTCTCCAGGGGTCCTAGGAAATCAACCAGACGTCGTCATGGACAGCTTGTCTGTCCACGGCTTAGGCCTAGTTCATCCAAAGAAGGTCTTCGATTTCTACAACGAGCTCCATGCTTACTTAGCTTCTTGCGGAGTAGATGGAGTAAAGGTTGATGTGCAAAACATTATTGAGACCCTTGGTTCAGGACATGGAGGCAGAGTCTCGATCACACGCAGCTATCATCAATCACTCGAAGCCTCCATTGCTCGAAATTTTCCCGACAACGGATGCATTGCCTGCATGTGTCACAATACTGATGGCCTATATAGTTCAAAGCAGACTTCTGTTGTGAGAGCCTCTGATGACTTTTACCCACACGATCCTGCTTCTCACACCATTCATGTTTCATCTGTTGCATATAATGCACTTTTCCTTGGAGAATTCATGCAACCTGATTGGGACATGTTTCATAGTTTACATCCGGCGGCCGAGTATCATGCTGCAGCTCGTGCAATCAGTGGAGGTCCAATTTACGTTAGTGACAAACCAGGAAGACACAATTTTGATCTTCTAAAGAAGCTTGTTCTTCCTGATGGCTCAGTTCTCCGAGCTAAGTTACCTGCCCGGCCCACCGCTGACTCTCTATTTGTTGATCCAGCAAGAGATGGAACTAGGCTCATATGGAATTTGAACAAATGTTGTGGAGTGGTTGGTGTATTTAACTGTCAAGGTGCAGGGTGGTGCAAGATAGAGAAGAAAAACCGCGTTCATTGCGAAACACCCGGGACACTTAGTGGCTCTGTTTGTACCTCTGATGTTGACCTAATTGCTCAAGTAGCTGGTGCTGATTGGAATGGGGATGCTATTGTCTATGCTTACAGATCAGGCGACGTAATTCGACTACCAAAAGGTGCTTCAGTTCCAGTGACACTAAAAGTTCTAGAGTATGAACTTCTCCATTTCTATCCAATCAAGGAAATCGCACAAGGTATTTTCTTTGCACCAATAGGACTATTAGATATGTTTAACACTGGTGGAGCTGTAGACAAGTTTGAAATCCATAAAGCATGTGAAATGGATGATGGAGGGTTCAGCTCTGCCAGTTTTGAAAAAGAAGCAACAGCGTCTGTTAGCCTTAAAGTAACAGGAGGTGGTAGATTTGGGATTTACTCATCCAAGAAGCCACTTAAATGTGTGGTGTGTGACAATGAAACTGACTTCAACTATGACTCAGAGAATGGGTTGACAACTATCTTCATCCCAGTTCCAGTAGAGGACATGTATAGATGGCCAATAGAGATTCAGTTTTCAGTTGTCAAATCTTATTAG 2448 0.4322 MLRTTSVASEQTSCWIRIPPSWLPHRNHSNSRITFSNHHHHHKSLVVKCCNMTVTPKILINDGNLVVHGKTILSEVPDNIVVTPGNGKGIVTGAFVGATASNTKSLHVFPIGVLQDLRYLCCFRFKLWWMTHRVGTYGRDVPLETQFMLIEIKDSKNQQENSPVIYTVLLPLLEGQFRAVLQGNDKNEIEICLESGDPAVKTNQGLHMVYMHAGTNPFEVINQAVKAVEKHMQTFLHREKKRLPSFLDWFGWCTWDAFYTDVTAVGIEEGLKSLSEGGASPRFLIVDDGWQQIESKPKDADSVVQEGAQFATRLTGIKENTKFQKNGESNGLKHVVNQTKQNYNVKYFYVWHALAGYWGGVKPAAIGMEHFDTSLAYPKHSPGVLGNQPDVVMDSLSVHGLGLVHPKKVFDFYNELHAYLASCGVDGVKVDVQNIIETLGSGHGGRVSITRSYHQSLEASIARNFPDNGCIACMCHNTDGLYSSKQTSVVRASDDFYPHDPASHTIHVSSVAYNALFLGEFMQPDWDMFHSLHPAAEYHAAARAISGGPIYVSDKPGRHNFDLLKKLVLPDGSVLRAKLPARPTADSLFVDPARDGTRLIWNLNKCCGVVGVFNCQGAGWCKIEKKNRVHCETPGTLSGSVCTSDVDLIAQVAGADWNGDAIVYAYRSGDVIRLPKGASVPVTLKVLEYELLHFYPIKEIAQGIFFAPIGLLDMFNTGGAVDKFEIHKACEMDDGGFSSASFEKEATASVSLKVTGGGRFGIYSSKKPLKCVVCDNETDFNYDSENGLTTIFIPVPVEDMYRWPIEIQFSVVKSY 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02238 815 Gene3D Aldolase class I 249 567 IPR013785 -
Car04g02238 815 PANTHER - 52 808 IPR008811 -
Car04g02238 815 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 52 808 - -
Car04g02238 815 Pfam Raffinose synthase or seed imbibition protein Sip1 60 792 IPR008811 -
Car04g02238 815 SUPERFAMILY (Trans)glycosidases 246 568 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02238 Car-Chr4 32165367 32171743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02238 52 598 Glycoside Hydrolase AT3G57520 76.087 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02238 K06617 - gmx:100807861 1295.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02115 03 67385482 67390192 Car04g02238 04 32165367 32171743 PCT