Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02115 ATGACGGTGACACCTAAAATCTCAGTTAACGATGGAAACTTGGTTGTTCATGGCAAGACCATACTGAAAGGAGTACCAGAAAACATTGTCCTCACTCCAGGTTCTGGCAATGGCCTTCTTACCGGTGCATTTATTGGTGCTACTGCTTCCCATACCAAAAGCCTCCATGTCTTTCCCATTGGTATCTTAGAGGGTCTCAGGTTCATGTGTTGTTTCCGGTTCAAGCTATGGTGGATGACGCAGAGAATGGGAACTTGTGGGAGGGATATTCCTCTAGAGACCCAATTCATGCTCATAGAGACCAAACACACCGAAGGTGAACCCCAAGATTCTCCTATCATCTACACTGTCTTGCTTCCTCTATTGGAAGGTCCATTCCGAGCTGTTCTACAAGGCAATGAAAATTGCGAAATCGAGATTTGCCTTGAAAGTGGAGATCATGCTGTTGAGACTAATCAAGGCCTTCACATGGTTTACATGCATGCTGGCACCAACCCTTTTGAAGTCATCAACCAAGCTGTCAAGGCTGTGGAAAAGCACATGCAAACATTTCATCATCGTGAGAAGAAAAGGCTGCCATCTTTTCTTGATTGGTTTGGTTGGTGCACATGGGATGCTTTCTATACTGATGTAACAGCTGAGGGTGTTGAGGAAGGCTTGAAAAGTCTATCAGAGGGAGGTACACCTCCACGATTCCTCATCATAGACGATGGTTGGCAACAGATTGAAAGTAAAGCAAAGGATCCCGGCTGTGTTGTGCAAGAAGGAGCACAGTTTGCTACTAGGTTGACTGGGATTAAAGAGAATGCTAAATTTCAAAAGAATAAGAATGGACAGAACGACGAACAAATACCAGGTCTTAAACATCTAGTAGATGGAGTAAAGAAACATCACAATGTCAAAGATGTTTATGTATGGCATGCACTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGCAACTGGCATGGAACATTATGACACCGCCCTGGCGTACCCAGTGCAGTCACCAGGAGTACTTGGAAACCAACCGGACATTGTCATGGACAGCTTGGCTGTGCATGGTCTTGGTCTAGTACATCCAAAGAAGGTTTTCAACTTCTACAATGAACTCCATGCTTACTTAGCATCATGTGGAGTAGATGGAGTGAAGGTAGATGTACAAAACATTATTGAGACCCTTGGTGCTGGACACGGTGGTCGAGTCTCGCTTACACGCAGCTATCATCATGCGCTTGAGGCTTCCATTGCTCGTAACTTTGCTGACAATGGATGCATTGCGTGTATGTGTCACAACACTGATGGACTTTACAGTGCTAAGCAGACTGCTATTGTGAGAGCCTCTGATGATTTTTACCCGCATGATCCTGCTTCTCACACCATCCATATTTCTTCTGTTGCATACAATTCGCTTTTCCTTGGAGAATTTATGCAACCAGATTGGGACATGTTCCATAGTTTGCATCCAGCAGCAGAATATCATGCAGCAGCTCGTGCAATCGGTGGATGTCCAATTTATGTCAGTGATAAGCCAGGCAACCACAATTTTGATCTTCTTAAGAAGCTGGTTCTCGCTGATGGTTCAGTTCTTCGTGCACAGCTACCTGGCAGGCCTACCCGTGACTGTCTCTTTGTTGATCCGGCGAGAGATAGGACTAGCTTGCTCAAAATATGGAACATGAACAAATGTACTGGAGTTGTTGGTGTATTTAACTGCCAAGGTGCTGGGTGGTGCAAGGTAGAGAAGAAAACTCGCATCCACGATACATCTCCTGGTACACTCACTAGCTCTGTCAGTGCCTCTGATGTTGATCAAATCAACCAAGTAGCTGGTGTTGAATGGCATGGGGAGACTATTGTTTATGCTTACAGATCAGGTGAGGTGATACGGCTACCAAAAGGGGTTTCGATTCCAGTGACACTAAAGGTTCTGGAGTTTGAACTTTTCCATTTCTGTCCAATCCAAGAAATAGCACCAAGTATATCATTTGCCGCAATAGGCCTAATGGATATGTTCAACACTGGAGGAGCTGTGGAAGAGGTTGAAATCCATAAAGCCTCCGACAACAAACAAGAACTATTCGACGGCGAGGTTGTATCTGAACTGACAACTTCTCTCAGTCCTAACCGAACGAAAACAGCAACTGTTGCTCTAAAGGTCAGAGGAAGTGGCAAGTTTGGAGTTTACTCTTCTCAGCATCCACTTCAATGTGCAGTCGATGGCATTGATACCGATTTCAACTATGACTCAGAAACCGGGTTGACAACCTTCTCCATCCCAGTTCCTCAAGAGGGGATGTATAGATGGTCGATAGAGATTCAAATTTGA 2328 0.4497 MTVTPKISVNDGNLVVHGKTILKGVPENIVLTPGSGNGLLTGAFIGATASHTKSLHVFPIGILEGLRFMCCFRFKLWWMTQRMGTCGRDIPLETQFMLIETKHTEGEPQDSPIIYTVLLPLLEGPFRAVLQGNENCEIEICLESGDHAVETNQGLHMVYMHAGTNPFEVINQAVKAVEKHMQTFHHREKKRLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSEGGTPPRFLIIDDGWQQIESKAKDPGCVVQEGAQFATRLTGIKENAKFQKNKNGQNDEQIPGLKHLVDGVKKHHNVKDVYVWHALAGYWGGVKPAATGMEHYDTALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHHALEASIARNFADNGCIACMCHNTDGLYSAKQTAIVRASDDFYPHDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPAAEYHAAARAIGGCPIYVSDKPGNHNFDLLKKLVLADGSVLRAQLPGRPTRDCLFVDPARDRTSLLKIWNMNKCTGVVGVFNCQGAGWCKVEKKTRIHDTSPGTLTSSVSASDVDQINQVAGVEWHGETIVYAYRSGEVIRLPKGVSIPVTLKVLEFELFHFCPIQEIAPSISFAAIGLMDMFNTGGAVEEVEIHKASDNKQELFDGEVVSELTTSLSPNRTKTATVALKVRGSGKFGVYSSQHPLQCAVDGIDTDFNYDSETGLTTFSIPVPQEGMYRWSIEIQI 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02115 775 Pfam Raffinose synthase or seed imbibition protein Sip1 7 758 IPR008811 -
Car03g02115 775 SUPERFAMILY (Trans)glycosidases 195 523 IPR017853 -
Car03g02115 775 Gene3D Aldolase class I 198 523 IPR013785 -
Car03g02115 775 PANTHER - 1 775 IPR008811 -
Car03g02115 775 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02115 Car-Chr3 67385482 67390192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02115 1 550 Glycoside Hydrolase AT3G57520 83.303 0.0 984
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02115 K06617 - gmx:100807861 1377.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02115 03 67385482 67390192 Car04g02238 04 32165367 32171743 PCT