Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02136 ATGTTGACCGTTGTTCGTGTTCATCTTCCTTCTGATATTCCCATTGTTGGCTGTGAACTTACTCCTTATGTTTTACTTCGTCGCTTTGATAGAACTGTTACTACTGATGATGTTTCCGAAACTTTTCCTTTAGACGGACATTTCTTACGCTACAAGTGGTATCGTGTACATAGTGATACAAATGTTGCTGTCTGTAGCATACATCCATCTGAGCCGGCCACACTACAGTGCGTAGGTTGTATTAAGGCCAGAGTACCTGTTTCTAAAAGTTACCATTGCAACTCAAAGTGTTTTGCAGATGCATGGCAGCATCATCGTGTTGTACATGATCGTGCTGCAAATGCCGTTAATGAAAATGGAAATGAAGACGAGGAAGGATTTGGGCGCTTTAATAGTTCTGGTCCTGGGGTAACCAATTCCAACTTATCTGCGAGTGCTCCTTTGTATCCCACCGCAATAAAAAATGGCAATGAAACTTGGTTTGAAGTTGGACGATCTAAGACTTATACCCCAACTGCTGATGACATTGGCTATGTCCTTAAGTTTGAATGCTCTGTCGTTGAAGCAATGACAAAATTACCTGCGGGGCATGTAAACTCTTTACTAACTAATCGGGTCATTCCTGCTCCCTCACCTACTCCGCGCCAACTGATATGTGTTGATGGGATGGGGCATTTAGATCTTGATAGGCGTATGACATCTCTGGAAACTTTTACTGTTCTGTCATACAATGTTTTGTCTGAAGCAAGTGCCTCAAATGATCTGTATAATTACTGCCCTCCATGGGCCCTTTCTTGGCCATATCGCAGGCAAAATTTGTTACGAGAAATTGTTGGTTATCGTGCAGATATTATTTGCCTTCAGGAGGTTCAAAATAACCATTATGATGAATTTTTTGCTCCTGAACTGGACAAACATGGTTATAATGGTCTTTTCAAGAGAAAAACAACTGAGGTATCCAGTGGCAACACAATTGATGGTTGTGCAACATTTTTCCGCAGAGACAGATTTTCCCATGTGAAGAAATATGAGGTTGAGTTCAATAAGGCTGCACAGTCTTTAACAGATGCCATGATTCCAACCATTCAGAAGAAAACTGCCTTGAATCGACTGGTCAAGGATAATGTTGCACTAATAGTTGTTCTAGAAACTAAAGTTAACAATCAACCAGTTGATAATCTTGGGAAAAGGCAGCTTATTTGTGTGGCAAATACACACGTGCATGTCCAGCATGATCTAAAAGATGTCAAACTTTGGCAGGTGCACACTCTCTTAAAAGGGCTGGAAAAAATAGCTGCAAGTGCAGACATTCCAATGTTGGTTTGTGGAGACTTTAATTCTGTTCCTGGAAGTGCACCTCATGCACTTCTTGCAATGGGAAAGGTAGACCCATCACATCCTGATTTAACAGTTGACCCACTTAATATTTTACGCCCTCATAGCAAGTTGGTTCATCAGTTACCACTGGTTAGTGCATACTCGTCATTTGCAAGAACAGTAGGTCATGGGTTTGAGCAACATAAAATGAGACTGGATGGTGGAACAAACGAACCTTTATTTACAAGCGTCACTAGAGATTTTGTCGGCACTCTAGACTACATATTTTACACAGCGGATTCATTGGTTGTGGAATCATTATTGGAATTATTGGATGAGGAGAGTTTGAGGAAGGACACTGCACTTCCTTCACCTGGATGGTCCTCAGACCATATAGCTCTCTTAGCGGAGTTTCGCTGCTGTAAGAGTAAGTCTAGGCATTGA 1761 0.4145 MLTVVRVHLPSDIPIVGCELTPYVLLRRFDRTVTTDDVSETFPLDGHFLRYKWYRVHSDTNVAVCSIHPSEPATLQCVGCIKARVPVSKSYHCNSKCFADAWQHHRVVHDRAANAVNENGNEDEEGFGRFNSSGPGVTNSNLSASAPLYPTAIKNGNETWFEVGRSKTYTPTADDIGYVLKFECSVVEAMTKLPAGHVNSLLTNRVIPAPSPTPRQLICVDGMGHLDLDRRMTSLETFTVLSYNVLSEASASNDLYNYCPPWALSWPYRRQNLLREIVGYRADIICLQEVQNNHYDEFFAPELDKHGYNGLFKRKTTEVSSGNTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTIQKKTALNRLVKDNVALIVVLETKVNNQPVDNLGKRQLICVANTHVHVQHDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLTVDPLNILRPHSKLVHQLPLVSAYSSFARTVGHGFEQHKMRLDGGTNEPLFTSVTRDFVGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPGWSSDHIALLAEFRCCKSKSRH 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02136 586 Gene3D Endonuclease/exonuclease/phosphatase 207 585 IPR036691 -
Car04g02136 586 PANTHER CARBON CATABOLITE REPRESSOR-LIKE PROTEIN 36 583 - -
Car04g02136 586 CDD Deadenylase_CCR4 240 579 - -
Car04g02136 586 SUPERFAMILY DNase I-like 237 580 IPR036691 -
Car04g02136 586 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 36 583 - -
Car04g02136 586 Pfam Endonuclease/Exonuclease/phosphatase family 241 570 IPR005135 GO:0003824
Car04g02136 586 Pfam zf-MYND-like zinc finger, mRNA-binding 71 110 IPR031615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02136 Car-Chr4 28149893 28156277 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02136 K12603 - gmx:100819402 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02717 03 72834210 72839102 Car04g02136 04 28149893 28156277 PCT