Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02717 ATGCTGAACGTGCTACGTGTTCATCTCCCTTCTGATATTCCCATTGTTGGCTGTGAGCTCACGCCTTATGTGCTCTTACGCCGACCTGATAAAACCGTTACAACAGATGATGTCTCTGAAACCTCTCCTTTAGATGGCCATTTTTTGCGCTATAAGTGGTATCGTGTACAGAGTGATAAAAAGGTTGCTGTTTGTAGTGTACATCCGTCCGAGCAGGCCACACTACAGTGCCTAGGTTGTCTTAAGGCTAAAATACCCGTTGCAAAAAGTTATCACTGCACTCCAAAGTGTTTTTCAGATGCATGGCAGCATCATCGTGTCTTGCATGACCGTGCCGCAAGTGCAGTTAATGAAAATGGAAATGAAGAGGAGGAGGTATTTGGGAGATTTAATAATTCTGGGTCTGGGTCACTCAACACCAGCTTATCCTCCAGTGCGTCAAGTGCCAGCCTGACAAATGGGTCTGCAAATGTGTATCCAGGAGCCATTACACAACGAAATGGCGGTGAAACTTGGTTTGAAGTTGGACGATCAAAGACATATACCCCATCAGCTGATGACATTGGTCATGTCCTTAAATTTGAGTGTGTTGTAGTTGATGCAGAGACAAAACTTACAGTGGGGCACACAAACACTATACTAACTTCTCGAACGTTTACTGTTTTATCATACAACATATTGTCTGATGCATTTGCCTCAAATGATCTATACAATTACTGCCCTTCGTGGGCTCTTTCATGGCCGTATCGCAGACAAAATTTGTTGCGAGAAATAGTTGGGTACCGTGCCGATATTATTTGTCTCCAGGAGGTTCAAAGTGATCATTACGATGAATTTTTCGCCCCTGAACTGGACAAACATGGCTATTATGGTCTTTACAAGAGAAAAACAAATGAGGTTGTATATAATGGCAACATAAATACGATTGATGGTTGTGCAACATTTTTCCGTAGAGACAGATTCTCACATGTGAAAAAATATGAGGTTGAGTTTAATAAGGCTGCACAGTCTTTAACAGATGCCATGATTCCAACCACTCAGAAGAAAACTGCCTTGAATCGGCTGGTTAAGGATAATGTCGCACTAATAGTTGTTTTAGAAGCAAAAGTTAATAATCAGCCTATTGATAATCCAGGGAAAAGACAGCTTCTGTGTGTGGCAAATACACATGTGAATGTCCACCCAGATTTAAAGGATGTCAAGCTTTGGCAGGTGCACACTCTCTTAAAAGGATTGGAGAAAATTGCTATCAGTGCAGAGATTCCAATGCTGGTTTGTGGAGACTTCAATTCACTTCCGGGAAGTGCTCCTCATGCACTTCTTGCAATGGGGAAGGTAGACCCATCCCATCCCGATTTAGCAGTTGACCCACTCAACATATTGCGTCCTCACAGCAAGTTGGTTCACAAGTTGCCACTGGTCAGTGCTTATTCTTCGTTTGCAAGAACGGGTCTTGGATATGAGCAGCATAAGCGGAGACTGGATAACTCAACAAATGAACCTTTATTCACAAATGTCACTAGAGATTTTATTGGCTCTCTTGATTACATATTTTACACAGCGGATTCTTTGGTTGTGGAGTCATTATTAGAACTATTGGATGAGGCGAGCGATGATGACTCACAACTCATAAGGACAGATCCAGTGACACGTAAAGATAAAAGTTGA 1668 0.4221 MLNVLRVHLPSDIPIVGCELTPYVLLRRPDKTVTTDDVSETSPLDGHFLRYKWYRVQSDKKVAVCSVHPSEQATLQCLGCLKAKIPVAKSYHCTPKCFSDAWQHHRVLHDRAASAVNENGNEEEEVFGRFNNSGSGSLNTSLSSSASSASLTNGSANVYPGAITQRNGGETWFEVGRSKTYTPSADDIGHVLKFECVVVDAETKLTVGHTNTILTSRTFTVLSYNILSDAFASNDLYNYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYDEFFAPELDKHGYYGLYKRKTNEVVYNGNINTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTTQKKTALNRLVKDNVALIVVLEAKVNNQPIDNPGKRQLLCVANTHVNVHPDLKDVKLWQVHTLLKGLEKIAISAEIPMLVCGDFNSLPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLVHKLPLVSAYSSFARTGLGYEQHKRRLDNSTNEPLFTNVTRDFIGSLDYIFYTADSLVVESLLELLDEASDDDSQLIRTDPVTRKDKS 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02717 555 Pfam Endonuclease/Exonuclease/phosphatase family 222 538 IPR005135 GO:0003824
Car03g02717 555 CDD Deadenylase_CCR4 221 522 - -
Car03g02717 555 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 1-LIKE 216 537 - -
Car03g02717 555 SUPERFAMILY DNase I-like 213 526 IPR036691 -
Car03g02717 555 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 1-LIKE 34 217 - -
Car03g02717 555 Gene3D Endonuclease/exonuclease/phosphatase 198 544 IPR036691 -
Car03g02717 555 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 34 217 - -
Car03g02717 555 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 216 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02717 Car-Chr3 72834210 72839102 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02717 K12603 - gmx:100808935 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02717 03 72834210 72839102 Car04g02136 04 28149893 28156277 PCT