Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01908 ATGTTCAAGAAAATTATGAAAGGAGGGCACAAAAAGCCCTCCAAATCCGACTCAAACGATCCTCCTCCGTCTGGTAACAACCGCAATTCATCTGCACCTTCCCCCAATGTTGTCGTCAACCACGCCTCACGTGGCGGCGCCGGAGGAACTTCTGTTGCTAGTTCTGCCGCTAATTTCTCCATGACTCCAGCCTCCGGAACAATGGAACCGGTTCCTTTGTTCCGTGATGTTCCGGTTTCTGATAAGCAGAACCTCTTCCTCAAGAAGCTTCACATATGCTGCTTCTCGCTTGATTTCACCGATACGCTGAAAAACGTTAGAGAGAAAGAGATCAAGCGACAAGCTTTGATGGAACTCGTGGAGTTTATCCAATCAGGTTCCGGTAAAATATCGGAGAGTTCTCAGGAAGAGATGATAAGAATGATATCTATCAACATTTTCCGGTGCTTACCACCGGCATCTCACGAGAATACCGGTCAAGAGCCTACCGATCCCGAAGAGGAGGAGCCTTGTTTGGAGCCAGCTTGGCCACACTTGCAGCTCGTTTACGAGCTTCTTCTCAGATACGTGGTTTCCTCCGATACTGATACAAAGGTTGCAAAACGGTACATTGATCATTCCTTCGTGCTCAAGTTGCTTGATTTATTTGATTCTGAAGACCCACGTGAGCGTGAGTATTTGAAAACCATTCTGCATCGTATATATGGAAAATTCATGGTTCATAGACCATTTATTAGAAAAGCAATTAACAACATTTTTTATCGGTTCATATATGAAACTGAGAGACACTGTGGTATTGGGGAGCTTTTGGAGATTCTTGGTAGCATTATTAATGGGTTTGCTTTGCCTATGAAAGAGGAGCACAAGTTGTTTCTTGTAAGGGCTCTTTTGCCACTGCACAAACCTAAATCGGTTGCTATGTACCACCAGCAGTTATCTTACTGTATAACTCAGTTTGTTGAGAAGGATTTCAAGCTGGCTGATACGGTTATTAGGGGCTTGTTGAAGTATTGGCCTGTTACAAATTGCCAGAAGGAAGTTCTCTTCCTTGGAGAACTTGAGGAAGTGTTGGAGGCTACACAAGCTGCTGAATTCCAACGCTGCATGGTTCCACTTTTCAAACAGATTTCCCGCTGCCTCAATAGTTTTCACTTTCAGGTTGCAGAGCGAGCCCTCTTTTTGTGGAATAATGAGCATATTGTGAGCTTAATTGCTCAAAACAGGACTGTGGTATTACCAATAATATTTGAAGCGTTTGAGAGAAATATTGAAGGTCACTGGAACCAGGCAGTTCATGGGCTGACTGTGAATGTACGCAAAATGTTCATCGAAATGGATGCAGAATTGTTTGAAGAGTGTCAGAGGCATCATACAGAGAAACGGGCAAAAGCCAAAGATGTGGCAGAGCAGCGGGAATTGAACTGGAAGAGACTGGCAGAAGCGGCTGCACAGAACGGCGTGGCAGATATGGTCACAGATTAG 1482 0.4453 MFKKIMKGGHKKPSKSDSNDPPPSGNNRNSSAPSPNVVVNHASRGGAGGTSVASSAANFSMTPASGTMEPVPLFRDVPVSDKQNLFLKKLHICCFSLDFTDTLKNVREKEIKRQALMELVEFIQSGSGKISESSQEEMIRMISINIFRCLPPASHENTGQEPTDPEEEEPCLEPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHCGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVAMYHQQLSYCITQFVEKDFKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQAAEFQRCMVPLFKQISRCLNSFHFQVAERALFLWNNEHIVSLIAQNRTVVLPIIFEAFERNIEGHWNQAVHGLTVNVRKMFIEMDAELFEECQRHHTEKRAKAKDVAEQRELNWKRLAEAAAQNGVADMVTD 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01908 493 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 486 - -
Car04g01908 493 PIRSF PP2A_B56 3 492 IPR002554 GO:0000159|GO:0007165|GO:0019888
Car04g01908 493 Gene3D - 78 481 IPR011989 -
Car04g01908 493 MobiDBLite consensus disorder prediction 1 54 - -
Car04g01908 493 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 486 IPR002554 GO:0000159|GO:0007165|GO:0019888
Car04g01908 493 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 72 482 IPR002554 GO:0000159|GO:0007165|GO:0019888
Car04g01908 493 MobiDBLite consensus disorder prediction 18 38 - -
Car04g01908 493 SUPERFAMILY ARM repeat 83 464 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01908 Car-Chr4 20927350 20934556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01908 K11584 - gmx:100795277 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01908 04 20927350 20934556 Car04g01908 04 20927350 20934556 ECH
Car03g02521 03 71110756 71116631 Car04g01908 04 20927350 20934556 PCT