Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02521 ATGTTCAAGAGAATAATGAAGGGAGGGCAAAAGAAACCCTCCAAATCGGATTCAACCGATGGATACGCTCCTCCGGCGAACAATCCAACGGCGGTAGTTGTGCCTCCGCCTTCGGGAACAATCGAACCGCTTCCATTGTTCCGTGACGTTCCGGTTTCCGAGAGACAGAATTTGTTTATCCGGAAGCTTCAGATTTGTTGCCATTCGTTGGATTTCACCGACACGATGAAATCGGTTCGGGAGAAGGAAATCAAGAGGCAAACGTTGATGGAATTGGTTGAATTCATTCAATCTGGTTCCGGTAAGATAACTGAGATTTGTCAAGAAGAGATGATTAAAATGGTGTCGGTGAATATTTTCCGGTGTCTCCCACCGGCGTCGCACGAGAACACCGGGCAAGACACCGCAGATCCGGAAGACGAGGAACCGTCTTTAGAGCCAGCATGGCCTCATTTGCAGCTTGTTTATGAGCTTCTTCTTAGATATGTGGTTTCATCTGATACTGATACTAAGGTAGCTAAACGTTACATTGATCATTCCTTTGTGCTTAAATTGCTTGATTTGTTTGATTCCGAGGACCCTAGAGAGCGTGAGTATGTGAAAACTATATTGCATCGCGTGTATGGAAAATTCATGGTTCTTAGACCTTTTATTAGGAAGGCTATTAATAACATATTTTACCGTTTTATATATGAGACTGAGAGACATAGTGGGATTGGTGAGCTTCTTGAGATTCTTGGGAGTGTCATTAATGGGTTTGCTTTGCCTATGAAGGAGGAACATAAGTTGTTTCTTGTGAGGGCTTTGTTGCCTTTGCATAAACCTAAACCTGTTGCTGTGTACCATCAACAATTGTCTTACTGCATCTCTCAGTTTGTTGAGAAGGATTATAAGTTGGCGGATACTGTTATTAGGGGTTTGTTGAAGTATTGGCCCCTCACCAATTGCCAGAAGGAAATTTTATTTCTTGGGGAGCTGGAGGAGGTGCTGGAGGCTATGCAGGCTGCAGAATTCCAACGCTGCATGGTTCTTCTTTTTAGACAGATTGCACGTTGTCTCAATAGTCCGCAATTTCAGGTCGCAGAACGGACCCTCTTTTTGTGGAATAATGAGCACATTGTCAGTTTAATTGCCCAAAACAGGACTGTTGTATTACCGATAATATTTGAAGCATTGGAGAAAAATGTACAGAGTCATTGGAACCAGGCTGTTAATGGGCTGACTGTGAATGTTAGAAAAATGTTTGTTGAAATGGATGCTGAATTATTTGAAGAGTGCCAGAGGCAGTATTTGGAGAGAGAGGCTAAGGCCAAAGAGGTGGAAGAGCAGCGGGAATTGAATTGGAAGAGACTGTCAGATGTTGCTGCACAAAATGGGCCAGATATGATTATAGTTTAG 1398 0.4313 MFKRIMKGGQKKPSKSDSTDGYAPPANNPTAVVVPPPSGTIEPLPLFRDVPVSERQNLFIRKLQICCHSLDFTDTMKSVREKEIKRQTLMELVEFIQSGSGKITEICQEEMIKMVSVNIFRCLPPASHENTGQDTADPEDEEPSLEPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYVKTILHRVYGKFMVLRPFIRKAINNIFYRFIYETERHSGIGELLEILGSVINGFALPMKEEHKLFLVRALLPLHKPKPVAVYHQQLSYCISQFVEKDYKLADTVIRGLLKYWPLTNCQKEILFLGELEEVLEAMQAAEFQRCMVLLFRQIARCLNSPQFQVAERTLFLWNNEHIVSLIAQNRTVVLPIIFEALEKNVQSHWNQAVNGLTVNVRKMFVEMDAELFEECQRQYLEREAKAKEVEEQRELNWKRLSDVAAQNGPDMIIV 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02521 465 Coils Coil 423 443 - -
Car03g02521 465 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 462 IPR002554 GO:0000159|GO:0007165|GO:0019888
Car03g02521 465 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 44 454 IPR002554 GO:0000159|GO:0007165|GO:0019888
Car03g02521 465 MobiDBLite consensus disorder prediction 1 36 - -
Car03g02521 465 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 462 - -
Car03g02521 465 Gene3D - 51 454 IPR011989 -
Car03g02521 465 SUPERFAMILY ARM repeat 56 437 IPR016024 -
Car03g02521 465 PIRSF PP2A_B56 10 462 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02521 Car-Chr3 71110756 71116631 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02521 K11584 - gmx:100798308 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02521 03 71110756 71116631 Car03g02521 03 71110756 71116631 ECH
Car03g02521 03 71110756 71116631 Car04g01908 04 20927350 20934556 PCT